RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 RPL11P62913 178 aaKnown RBP6.17□□□□□ -1.42
USP28-203ENST00000537490 TMEM187Q14656 261 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 RBMS2Q15434 407 aaKnown RBP6.17□□□□□ -1.42
USP28-203ENST00000537490 RNASE10Q5GAN6 216 aaKnown RBP6.17□□□□□ -1.42
USP28-203ENST00000537490 Q6ZRM9 215 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 SLC35G3Q8N808 338 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 OR4D10Q8NGI6 311 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 ZNF486Q96H40 463 aaPredicted RBP6.17□□□□□ -1.42
USP28-203ENST00000537490 ABHD1Q96SE0 405 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 NAA50Q9GZZ1 169 aaKnown RBP6.17□□□□□ -1.42
USP28-203ENST00000537490 C11orf68Q9H3H3 251 aaKnown RBP6.17□□□□□ -1.42
USP28-203ENST00000537490 K7EQG2 157 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 CLN5O75503 358 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 IFNA4P05014 189 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 NPPCP23582 126 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 HOXA1P49639 335 aaPredicted RBP6.16□□□□□ -1.42
USP28-203ENST00000537490 SUB1P53999 127 aaKnown RBP eCLIP6.16□□□□□ -1.42
USP28-203ENST00000537490 TRIM16LQ309B1 348 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 MZT2AQ6P582 158 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 ARRDC1Q8N5I2 433 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 PDCD10Q9BUL8 212 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 MFFQ9GZY8 342 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 EXTL2Q9UBQ6 330 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 MTFP1Q9UDX5 166 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 RABAC1Q9UI14 185 aa6.16□□□□□ -1.42
USP28-203ENST00000537490 A0A1W2PS18 150 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 KNCNA6PVL3 124 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 CORTO00230 105 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 ATG12O94817 140 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 IGKV1-17P01599 117 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 CD74P04233 296 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 RBMY1A1P0DJD3 496 aaKnown RBP6.15□□□□□ -1.42
USP28-203ENST00000537490 RBMY1CP0DJD4 496 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 UCP1P25874 307 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 CRYBB3P26998 211 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 OPRK1P41145 380 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 RPL5P46777 297 aaKnown RBP6.15□□□□□ -1.42
USP28-203ENST00000537490 P2RY1P47900 373 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.42
USP28-203ENST00000537490 CTF1Q16619 201 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 BSXQ3C1V8 233 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 TIGITQ495A1 244 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 TRPT1Q86TN4 253 aaKnown RBP6.15□□□□□ -1.42
USP28-203ENST00000537490 STHQ8IWL8 128 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 Q8NAQ8 132 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 TMEM229BQ8NBD8 167 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 STXBP6Q8NFX7 210 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 OR13C8Q8NGS7 320 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 OR4X1Q8NH49 305 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 TERB2Q8NHR7 220 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 ZFAND1Q8TCF1 268 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 MARCH1Q8TCQ1 289 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 TMEM230Q96A57 120 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 RRNAD1Q96FB5 475 aaKnown RBP6.15□□□□□ -1.42
USP28-203ENST00000537490 METTL26Q96S19 204 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 KRTAP17-1Q9BYP8 105 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 TMEM231Q9H6L2 316 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 ENY2Q9NPA8 101 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 COPZ2Q9P299 210 aa6.15□□□□□ -1.42
USP28-203ENST00000537490 IGHV4-28A0A0C4DH34 117 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 GABARAPO95166 117 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 CDS2O95674 445 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 RAB3DO95716 219 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 OR5AC1P0C628 307 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 ZNF688P0C7X2 276 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 ZNF182P17025 639 aaPredicted RBP6.14□□□□□ -1.43
USP28-203ENST00000537490 TBPP20226 339 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 SPCS3P61009 180 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 SCGB2B2Q4G0G5 96 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 AARDQ4LEZ3 155 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 FAAP20Q6NZ36 180 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 STEAP1BQ6NZ63 245 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 CCDC71LQ8N9Z2 235 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 RNASE11Q8TAA1 199 aaKnown RBP6.14□□□□□ -1.43
USP28-203ENST00000537490 LHFPL5Q8TAF8 219 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 C2CD4CQ8TF44 421 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 DCANP1Q8TF63 244 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 GLYATL2Q8WU03 294 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 GPR146Q96CH1 333 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 GRAMD2BQ96HH9 432 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 RTBDNQ9BSG5 229 aaPredicted RBP6.14□□□□□ -1.43
USP28-203ENST00000537490 MIXL1Q9H2W2 232 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 APLNQ9ULZ1 77 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 U3KQE9 123 aa6.14□□□□□ -1.43
USP28-203ENST00000537490 TRAV30A0A087WSZ9 112 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 TEX13DA0A0J9YY54 714 aaPredicted RBP6.13□□□□□ -1.43
USP28-203ENST00000537490 IGLL5B9A064 214 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 J3QL48 77 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 IGLC1P0CG04 106 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 C4BPBP20851 252 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 TAS2R19P59542 299 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 ACTL10Q5JWF8 245 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 PRSS54Q6PEW0 395 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 MORN3Q6PF18 240 aaPredicted RBP6.13□□□□□ -1.43
USP28-203ENST00000537490 SELENOHQ8IZQ5 122 aaKnown RBP6.13□□□□□ -1.43
USP28-203ENST00000537490 OR52E5Q8NH55 327 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 TMEM170AQ8WVE7 144 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 AP3S1Q92572 193 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 TMEM222Q9H0R3 208 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms