RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 OR11H2Q8NH07 326 aa10.24□□□□□ -0.77
SYNE1-235ENST00000537033 PHLDA1Q8WV24 401 aaPredicted RBP10.24□□□□□ -0.77
SYNE1-235ENST00000537033 METTL26Q96S19 204 aa10.24□□□□□ -0.77
SYNE1-235ENST00000537033 RABAC1Q9UI14 185 aa10.24□□□□□ -0.77
SYNE1-235ENST00000537033 C14orf166Q9Y224 244 aaKnown RBP10.24□□□□□ -0.77
SYNE1-235ENST00000537033 ALMS1Q8TCU4 4167 aa10.24□□□□□ -0.77
SYNE1-235ENST00000537033 RPS10-NUDT3A0A1W2PQS6 291 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 RGS5O15539 181 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 CLN5O75503 358 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 APOHP02749 345 aaPredicted RBP10.23□□□□□ -0.77
SYNE1-235ENST00000537033 CD74P04233 296 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 UCP1P25874 307 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 DEFB131AP59861 70 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 MEF2DQ14814 521 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 CTF1Q16619 201 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 STEAP1BQ6NZ63 245 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 FAM219AQ8IW50 185 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 STHQ8IWL8 128 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 OR4D10Q8NGI6 311 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 MARCH1Q8TCQ1 289 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 GRAMD2BQ96HH9 432 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 ABHD1Q96SE0 405 aa10.23□□□□□ -0.77
SYNE1-235ENST00000537033 NAA50Q9GZZ1 169 aaKnown RBP10.23□□□□□ -0.77
SYNE1-235ENST00000537033 C11orf68Q9H3H3 251 aaKnown RBP10.23□□□□□ -0.77
SYNE1-235ENST00000537033 TRAV30A0A087WSZ9 112 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 TEX13DA0A0J9YY54 714 aaPredicted RBP10.22□□□□□ -0.77
SYNE1-235ENST00000537033 A0A1B0GU03 582 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 GABARAPH6UMI1 98 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 IFNA4P05014 189 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 RPL5P46777 297 aaKnown RBP10.22□□□□□ -0.77
SYNE1-235ENST00000537033 EIF2B2P49770 351 aaKnown RBP10.22□□□□□ -0.77
SYNE1-235ENST00000537033 SPCS3P61009 180 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 MRPS10P82664 201 aaKnown RBP10.22□□□□□ -0.77
SYNE1-235ENST00000537033 SSBP1Q04837 148 aaKnown RBP10.22□□□□□ -0.77
SYNE1-235ENST00000537033 TMEM187Q14656 261 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 RBMS2Q15434 407 aaKnown RBP10.22□□□□□ -0.77
SYNE1-235ENST00000537033 GPR107Q5VW38 600 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 LEMD1Q68G75 181 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 PVRIGQ6DKI7 326 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 STXBP6Q8NFX7 210 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 OR4X1Q8NH49 305 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 C11orf45Q8TAV5 145 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 TMEM230Q96A57 120 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.22□□□□□ -0.77
SYNE1-235ENST00000537033 FBXL17Q9UF56 701 aa10.22□□□□□ -0.77
SYNE1-235ENST00000537033 EPPK1P58107 5090 aaKnown RBP10.21□□□□□ -0.77
SYNE1-235ENST00000537033 DISC1C4P0D8 188 aa10.21□□□□□ -0.77
SYNE1-235ENST00000537033 OR5AC1P0C628 307 aa10.21□□□□□ -0.77
SYNE1-235ENST00000537033 HTR2BP41595 481 aa10.21□□□□□ -0.77
SYNE1-235ENST00000537033 LILRB2Q8N423 598 aa10.21□□□□□ -0.77
SYNE1-235ENST00000537033 RBPMSQ93062 196 aaKnown RBP10.21□□□□□ -0.77
SYNE1-235ENST00000537033 TMEM222Q9H0R3 208 aa10.21□□□□□ -0.77
SYNE1-235ENST00000537033 HEYLQ9NQ87 328 aaPredicted RBP10.21□□□□□ -0.77
SYNE1-235ENST00000537033 A0A0G2JRQ6 117 aa10.2□□□□□ -0.78
SYNE1-235ENST00000537033 CDS2O95674 445 aa10.2□□□□□ -0.78
SYNE1-235ENST00000537033 CRYBB3P26998 211 aa10.2□□□□□ -0.78
SYNE1-235ENST00000537033 P2RY1P47900 373 aa10.2□□□□□ -0.78
SYNE1-235ENST00000537033 NANOS2P60321 138 aaKnown RBP10.2□□□□□ -0.78
SYNE1-235ENST00000537033 DHODHQ02127 395 aa10.2□□□□□ -0.78
SYNE1-235ENST00000537033 SURF2Q15527 256 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-235ENST00000537033 TMEM41BQ5BJD5 291 aa10.2□□□□□ -0.78
SYNE1-235ENST00000537033 OR52E5Q8NH55 327 aa10.2□□□□□ -0.78
SYNE1-235ENST00000537033 FNDC4Q9H6D8 234 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-235ENST00000537033 NAA60Q9H7X0 242 aa10.2□□□□□ -0.78
SYNE1-235ENST00000537033 CEBPZOSA8MTT3 80 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 SMIM18P0DKX4 95 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 SLC25A4P12235 298 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 BSXQ3C1V8 233 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 TIGITQ495A1 244 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 AARDQ4LEZ3 155 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 FAAP20Q6NZ36 180 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 GPR141Q7Z602 305 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 FAM24BQ8N5W8 94 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 SLC24A4Q8NFF2 622 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 OR1S2Q8NGQ3 325 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 MRPL36Q9P0J6 103 aaKnown RBP10.19□□□□□ -0.78
SYNE1-235ENST00000537033 CACNG5Q9UF02 275 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 CACFD1Q9UGQ2 172 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 HYDINQ4G0P3 5121 aa10.19□□□□□ -0.78
SYNE1-235ENST00000537033 HELTA6NFD8 242 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 K7EQG2 157 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 AKAIN1P0CW23 69 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 SPP1P10451 314 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 RND2P52198 227 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 IL18Q14116 193 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 TMEM268Q5VZI3 342 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 LGALS9CQ6DKI2 356 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 ETFRF1Q6IPR1 90 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 MORN3Q6PF18 240 aaPredicted RBP10.18□□□□□ -0.78
SYNE1-235ENST00000537033 Q6ZRM9 215 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 NOXA1Q86UR1 476 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 CENPSQ8N2Z9 138 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 RNASEH2CQ8TDP1 164 aaKnown RBP10.18□□□□□ -0.78
SYNE1-235ENST00000537033 Q8WTZ3 238 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 GLYATL2Q8WU03 294 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 SMIM4Q8WVI0 70 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 PRRT1Q99946 306 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 MRPS26Q9BYN8 205 aaKnown RBP10.18□□□□□ -0.78
SYNE1-235ENST00000537033 MIXL1Q9H2W2 232 aa10.18□□□□□ -0.78
SYNE1-235ENST00000537033 RABL2AQ9UBK7 228 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms