RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 TMEM268Q5VZI3 342 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 TCF24Q7RTU0 167 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 WFDC3Q8IUB2 231 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 FAM219AQ8IW50 185 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 SELENOHQ8IZQ5 122 aaKnown RBP10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 STPG3Q8N7X2 389 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 ST8SIA2Q92186 375 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 RBPMSQ93062 196 aaKnown RBP10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 PRRT1Q99946 306 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 BCL7BQ9BQE9 202 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 FNDC4Q9H6D8 234 aaPredicted RBP10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 PRR13Q9NZ81 148 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 MRPL36Q9P0J6 103 aaKnown RBP10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 CACNG5Q9UF02 275 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 GPR132Q9UNW8 380 aa10.58□□□□□ -0.72
RTN3P1-201ENST00000536295 HYDINQ4G0P3 5121 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 A0A0J9YWU9 116 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 A0A1B0GU03 582 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 BMI1P35226 326 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 SPCS3P61009 180 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 RPL11P62913 178 aaKnown RBP10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 FAM90A2PQ658T7 463 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 PVRIGQ6DKI7 326 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 Q6ZWC4 215 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 LILRB2Q8N423 598 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 GPR146Q96CH1 333 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 GALNT14Q96FL9 552 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 SLIRPQ9GZT3 109 aaKnown RBP10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 HEYLQ9NQ87 328 aaPredicted RBP10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 MCUBQ9NWR8 336 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 RABL2AQ9UBK7 228 aaPredicted RBP10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 RSL24D1Q9UHA3 163 aaKnown RBP10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 RABL2BQ9UNT1 228 aa10.57□□□□□ -0.72
RTN3P1-201ENST00000536295 KIR2DL5BA0A0G2JN68 375 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 KIR2DL5BA0A0G2JPC4 375 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 ANKRD20A5PA0PJZ0 165 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 CEBPZOSA8MTT3 80 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 H3BMQ9 156 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 UBE2CO00762 179 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 GSTZ1O43708 216 aaPredicted RBP10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 CLN5O75503 358 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 DFFBO76075 338 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 JTBO76095 146 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 TNFSF8P32971 234 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 RPL5P46777 297 aaKnown RBP10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 PAFAH1B2P68402 229 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 PMS2P11Q13670 270 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 LYG2Q86SG7 212 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 KIR2DL5AQ8N109 375 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 OR52E5Q8NH55 327 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 KIR2DL5BQ8NHK3 375 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 MCFD2Q8NI22 146 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 VSIRQ9H7M9 311 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 MAP6D1Q9H9H5 199 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 TP53TG1Q9Y2A0 90 aa10.56□□□□□ -0.72
RTN3P1-201ENST00000536295 CXorf65A6NEN9 183 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 FABP12A6NFH5 140 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 DNASE2O00115 360 aaPredicted RBP10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 HTR2BP41595 481 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 CMC4P56277 68 aaPredicted RBP10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 BSXQ3C1V8 233 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 TIGITQ495A1 244 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 AARDQ4LEZ3 155 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 OR4X1Q8NH49 305 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 TMEM230Q96A57 120 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 RNF183Q96D59 192 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 MS4A6AQ9H2W1 248 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 SCP2D1Q9UJQ7 156 aa10.55□□□□□ -0.72
RTN3P1-201ENST00000536295 RPS10-NUDT3A0A1W2PQS6 291 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 SCGB2A1O75556 95 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 AKR1C4P17516 323 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 NPPCP23582 126 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 EWSR1Q01844 656 aaKnown RBP eCLIP10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 TMEM187Q14656 261 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 SLC24A4Q8NFF2 622 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 METTL26Q96S19 204 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 RABAC1Q9UI14 185 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 KCNIP3Q9Y2W7 256 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 TMEM56-RWDD3S4R434 201 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 DNAH1Q9P2D7 4330 aa10.54□□□□□ -0.72
RTN3P1-201ENST00000536295 CD5P06127 495 aa10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 SULT1A3P0DMM9 295 aa10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 SULT1A4P0DMN0 295 aa10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 RND2P52198 227 aa10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 LEMD1Q68G75 181 aa10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 FAM24BQ8N5W8 94 aa10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 SCGB3A2Q96PL1 93 aa10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 SOSTQ9BQB4 213 aa10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 CSTL1Q9H114 145 aa10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 TMEM231Q9H6L2 316 aa10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 PLECQ15149 4684 aaKnown RBP10.53□□□□□ -0.72
RTN3P1-201ENST00000536295 TRAV30A0A087WSZ9 112 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 A0A1W2PS18 150 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 CCDC160A6NGH7 325 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 MPTX1A8MV57 137 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 IGKV1-17P01599 117 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 DEFB131AP59861 70 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 TNFRSF9Q07011 255 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms