RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 CMTM2Q8TAZ6 248 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 CACNG8Q8WXS5 425 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 GAFA1Q96PS6 74 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 RNF2Q99496 336 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 NABP2Q9BQ15 211 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 SNHG12Q9BXW3 62 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 GNB1LQ9BYB4 327 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 MRPL32Q9BYC8 188 aaKnown RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 PLEKHA3Q9HB20 300 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 BET1LQ9NYM9 111 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 RNF7Q9UBF6 113 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 RPUSD1Q9UJJ7 312 aaKnown RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 OR51B2Q9Y5P1 312 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 CHD3Q12873 2000 aaKnown RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 ESPL1Q14674 2120 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 TEX50A0A1B0GTY4 177 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 A0A1W2PRX2 142 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 SMIM27A0A1W2PRY6 76 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 PSMB11A5LHX3 300 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 HELTA6NFD8 242 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 SH2D7A6NKC9 451 aaPredicted RBP4.64□□□□□ -1.67
VPS33A-203ENST00000536212 SRRM4A7MD48 611 aaKnown RBP4.64□□□□□ -1.67
VPS33A-203ENST00000536212 J3QR06 171 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 M0R143 59 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 SLC17A3O00476 420 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 SPRY3O43610 288 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 IGLV2-8P01709 118 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 MT-ND6P03923 174 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 REG1AP05451 166 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 C8orf88P0DMB2 117 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 CRISP2P16562 243 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 CBLN1P23435 193 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 CRYBB3P26998 211 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF83P51522 516 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 TAS2R45P59539 299 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 CX3CL1P78423 397 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 RPL19P84098 196 aaKnown RBP4.64□□□□□ -1.67
VPS33A-203ENST00000536212 NHLH1Q02575 133 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 PSG5Q15238 335 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 RPEL1Q2QD12 228 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 CENPWQ5EE01 88 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 TPTE2P1Q5T6R2 138 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 LEMD1Q68G75 181 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 ETFRF1Q6IPR1 90 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 TMEM136Q6ZRR5 245 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF833PQ6ZTB9 187 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 MMD2Q8IY49 270 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 LYG1Q8N1E2 194 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 FAM167A-AS1Q96KT0 104 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 IGF2BP2-AS1Q96M15 143 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF714Q96N38 554 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 TBX15Q96SF7 602 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 CSTL1Q9H114 145 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 BEX4Q9NWD9 120 aaPredicted RBP4.64□□□□□ -1.67
VPS33A-203ENST00000536212 RNF24Q9Y225 148 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 CDH23Q9H251 3354 aa4.64□□□□□ -1.67
VPS33A-203ENST00000536212 GTF3C1Q12789 2109 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF407Q9C0G0 2248 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 IGKV1OR2-108A0A075B7D4 117 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 GRIFINA4D1Z8 144 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 B5MCH6 92 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 GGTLC3B5MD39 225 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 M0R1B8 84 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 FCN1O00602 326 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 MMP23AO75900 390 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 SERF1AO75920 110 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 IGHV1-46P01743 117 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 IGHV3-7P01780 117 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 LIPFP07098 398 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 MYOD1P15172 320 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 MC5RP33032 325 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 COMPP49747 757 aaPredicted RBP4.63□□□□□ -1.67
VPS33A-203ENST00000536212 GNG4P50150 75 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 PPOXP50336 477 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 TDGF1P3P51864 188 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 TNFAIP6P98066 277 aaPredicted RBP4.63□□□□□ -1.67
VPS33A-203ENST00000536212 PSG3Q16557 428 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 TIGITQ495A1 244 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 OR10J3Q5JRS4 329 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 FAM201AQ5SY85 155 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 PVRIGQ6DKI7 326 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 FAM71F2Q6NXP2 309 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 RASL11AQ6T310 242 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 PET117Q6UWS5 81 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 PRSS57Q6UWY2 283 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 IGFL3Q6UXB1 125 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 FAM231DQ6ZW35 169 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 DEFB123Q8N688 67 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 Q8N976 141 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 C8orf31Q8N9H6 132 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 ST6GALNAC3Q8NDV1 305 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 NUP37Q8NFH4 326 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 OR5AU1Q8NGC0 362 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 OR4A5Q8NH83 315 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 OSR1Q8TAX0 266 aaPredicted RBP4.63□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF596Q8TC21 504 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 WIPF2Q8TF74 440 aaPredicted RBP4.63□□□□□ -1.67
VPS33A-203ENST00000536212 LEAP2Q969E1 77 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF479Q96JC4 524 aa4.63□□□□□ -1.67
VPS33A-203ENST00000536212 VKORC1Q9BQB6 163 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms