RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 TATDN3Q17R31 274 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 SPSB3Q6PJ21 355 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 CACNG8Q8WXS5 425 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 TXN2Q99757 166 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ELOVL1Q9BW60 279 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 SIGLEC8Q9NYZ4 499 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 SYNGR2O43760 224 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 GNG7O60262 68 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 IFNA10P01566 189 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 IFNA21P01568 189 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 DEFA1P59665 94 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 DEFA3P59666 94 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 TM4SF20Q53R12 229 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 C12orf45Q8N5I9 185 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 RNASEH2CQ8TDP1 164 aaKnown RBP8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 TMEM190Q8WZ59 177 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PRR25Q96S07 402 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 MARVELD1Q9BSK0 173 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PEMTQ9UBM1 199 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 U3KQ87 197 aa8.58□□□□□ -1.04
TNFRSF1A-208ENST00000536194 DNAH3Q8TD57 4116 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 IGHV3OR16-8A0A075B7F1 116 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ZNF320A2RRD8 509 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 IZUMO1RA6ND01 250 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 WRBO00258 174 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 NUPL2O15504 423 aaKnown RBP8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 MED6O75586 246 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 TMEM50AO95807 157 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 FOLR2P14207 255 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 CBLN1P23435 193 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 NKX2-1P43699 371 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 POLR2GP62487 172 aaKnown RBP eCLIP8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 IAH1Q2TAA2 248 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 FAM106AQ4KMX7 169 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PRSS54Q6PEW0 395 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ZBTB8BQ8NAP8 495 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 UXS1Q8NBZ7 420 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 OR4X1Q8NH49 305 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 GAR1Q9NY12 217 aaKnown RBP8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ZNF256Q9Y2P7 627 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 RCL1Q9Y2P8 373 aaKnown RBP8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 SELENOKQ9Y6D0 94 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 SORL1Q92673 2214 aa8.57□□□□□ -1.04
TNFRSF1A-208ENST00000536194 RPS10-NUDT3A0A1W2PQS6 291 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PRSS46E5RG02 174 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 INMT-MINDY4F8WBC2 141 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 NDUFA4O00483 81 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 CLN5O75503 358 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 IGKV1-17P01599 117 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 NPBWR1P48145 328 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 RND2P52198 227 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PAX9P55771 341 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 CD69Q07108 199 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 TMEM116Q8NCL8 245 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 MRAPQ8TCY5 172 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 GSKIPQ9P0R6 139 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 MLXQ9UH92 298 aa8.56□□□□□ -1.04
TNFRSF1A-208ENST00000536194 H3BP45 60 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 SSSCA1O60232 199 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 SCGB1D2O95969 90 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 MBPP02686 304 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 IFNA4P05014 189 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 IGLC1P0CG04 106 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 C8orf88P0DMB2 117 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 SLC25A4P12235 298 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 GP9P14770 177 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 RELQ04864 619 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 IL15RAQ13261 267 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 DEFB114Q30KQ6 69 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 CD300EQ496F6 205 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 SLC16A13Q7RTY0 426 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 NOXA1Q86UR1 476 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 CIB3Q96Q77 187 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 C20orf24Q9BUV8 137 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ZFAND3Q9H8U3 227 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 DAZ1Q9NQZ3 744 aaKnown RBP8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 UFC1Q9Y3C8 167 aa8.55□□□□□ -1.04
TNFRSF1A-208ENST00000536194 C5orf51A6NDU8 294 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 SNRPGP15A8MWD9 76 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 FAM25EA8MYX2 175 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ZNF207O43670 478 aaKnown RBP8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PRAF2O60831 178 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 CCNKO75909 580 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 LY86O95711 162 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ELLP55199 621 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ATP5IP56385 69 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 GAMTQ14353 236 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 TIGITQ495A1 244 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 SPANXN5Q5MJ07 72 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ETFRF1Q6IPR1 90 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 BTNL8Q6UX41 500 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 NPIPB3Q92617 1050 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ACY3Q96HD9 319 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 C2orf50Q96LR7 162 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 C11orf1Q9H5F2 150 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 GPN1Q9HCN4 374 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PALMDQ9NP74 551 aa8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ZMAT5Q9UDW3 170 aaKnown RBP8.54□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PUS1Q9Y606 427 aaKnown RBP eCLIP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms