RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 LINC00479Q96M42 142 aa15.8■□□□□ 0.12
CAPN1-226ENST00000533820 DKK4Q9UBT3 224 aa15.8■□□□□ 0.12
CAPN1-226ENST00000533820 TRAV5A0A0B4J249 113 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 TSPOP30536 169 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 LGALS4P56470 323 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 TMEM14BQ9NUH8 114 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 TP73-AS1Q9UF72 201 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 OR2T8A6NH00 312 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 ATMQ13315 3056 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 DEFB109BQ30KR1 87 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 WDR73Q6P4I2 378 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 NIT1Q86X76 327 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 C1orf174Q8IYL3 243 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 ZCCHC24Q8N2G6 241 aaKnown RBP15.79■□□□□ 0.12
CAPN1-226ENST00000533820 PMCHP20382 165 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 CTRLP40313 264 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 SSBP3Q9BWW4 388 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-226ENST00000533820 GNB4Q9HAV0 340 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 PLSCR4Q9NRQ2 329 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 SLC35D1Q9NTN3 355 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 SLC25A15Q9Y619 301 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 V9GYV3 84 aa15.79■□□□□ 0.12
CAPN1-226ENST00000533820 TACC2O95359 2948 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 ACACAQ13085 2346 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 TRGV10A0A0A0MS01 117 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 FAM90A9PA6NNJ1 464 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 MORN5Q5VZ52 161 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 KBTBD11-OT1A0A1B0GTJ5 212 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 GAGE12BA1L429 117 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 PRR20EP86478 221 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 PRR20CP86479 221 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 PRR20DP86480 221 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 PRR20BP86481 221 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 PRR20AP86496 221 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 TXNDC17Q9BRA2 123 aa15.78■□□□□ 0.12
CAPN1-226ENST00000533820 TANC2Q9HCD6 1990 aa15.77■□□□□ 0.12
CAPN1-226ENST00000533820 SPAARA0A1B0GVQ0 90 aa15.77■□□□□ 0.12
CAPN1-226ENST00000533820 C1orf162Q8NEQ5 155 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-226ENST00000533820 OTOGLQ3ZCN5 2332 aa15.77■□□□□ 0.12
CAPN1-226ENST00000533820 TRGV8A0A0C4DH27 118 aa15.77■□□□□ 0.11
CAPN1-226ENST00000533820 GGTLC3B5MD39 225 aa15.77■□□□□ 0.11
CAPN1-226ENST00000533820 SEM1Q6ZVN7 128 aa15.77■□□□□ 0.11
CAPN1-226ENST00000533820 ZNF503Q96F45 646 aa15.77■□□□□ 0.11
CAPN1-226ENST00000533820 ZNF586Q9NXT0 402 aa15.77■□□□□ 0.11
CAPN1-226ENST00000533820 FOXA2Q9Y261 457 aaPredicted RBP15.77■□□□□ 0.11
CAPN1-226ENST00000533820 CORTO00230 105 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 PAFAH1B2P68402 229 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 MZT1Q08AG7 82 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 OR2T6Q8NHC8 308 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 RCHY1Q96PM5 261 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 DSCAML1Q8TD84 2053 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 TIGITQ495A1 244 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 PLA2G2CQ5R387 149 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 C22orf34Q6ZV56 151 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 SGK494Q96LW2 274 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 SIGLECL1Q8N7X8 197 aa15.76■□□□□ 0.11
CAPN1-226ENST00000533820 TRAV17A0A0B4J275 112 aa15.75■□□□□ 0.11
CAPN1-226ENST00000533820 PLAUP00749 431 aa15.75■□□□□ 0.11
CAPN1-226ENST00000533820 KIR2DS2P43631 304 aa15.75■□□□□ 0.11
CAPN1-226ENST00000533820 FAM19A2Q8N3H0 131 aa15.75■□□□□ 0.11
CAPN1-226ENST00000533820 AMTP48728 403 aa15.75■□□□□ 0.11
CAPN1-226ENST00000533820 CCL8P80075 99 aa15.75■□□□□ 0.11
CAPN1-226ENST00000533820 ZNF474Q6S9Z5 364 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-226ENST00000533820 NEUROG1Q92886 237 aa15.75■□□□□ 0.11
CAPN1-226ENST00000533820 CT45A6P0DMU7 189 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 CT45A5P0DMU8 189 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 CT45A7P0DMV0 189 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 CGB3P0DN86 165 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 CGB7P0DN87 165 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 SSBP2P81877 361 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-226ENST00000533820 SAMD13Q5VXD3 122 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 NTF3P20783 257 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 TNFAIP6P98066 277 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-226ENST00000533820 C10orf55Q5SWW7 151 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 Q8N976 141 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 OR1N2Q8NGR9 330 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 FAM168AQ92567 244 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 TECRQ9NZ01 308 aaKnown RBP15.74■□□□□ 0.11
CAPN1-226ENST00000533820 TEX50A0A1B0GTY4 177 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 SAA1P0DJI8 122 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-226ENST00000533820 DEFB124Q8NES8 71 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 C11orf52Q96A22 123 aa15.74■□□□□ 0.11
CAPN1-226ENST00000533820 C9JCJ5 164 aa15.73■□□□□ 0.11
CAPN1-226ENST00000533820 ZNF253O75346 499 aa15.73■□□□□ 0.11
CAPN1-226ENST00000533820 PYYP10082 97 aa15.73■□□□□ 0.11
CAPN1-226ENST00000533820 AREGP15514 252 aa15.73■□□□□ 0.11
CAPN1-226ENST00000533820 SRIP30626 198 aa15.73■□□□□ 0.11
CAPN1-226ENST00000533820 PRSS57Q6UWY2 283 aa15.73■□□□□ 0.11
CAPN1-226ENST00000533820 TMEM186Q96B77 213 aa15.73■□□□□ 0.11
CAPN1-226ENST00000533820 TBL2Q9Y4P3 447 aaKnown RBP15.73■□□□□ 0.11
CAPN1-226ENST00000533820 RNF7Q9UBF6 113 aa15.73■□□□□ 0.11
CAPN1-226ENST00000533820 E7EUB6 86 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 LGALS7P47929 136 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 PRRX1P54821 245 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 CR1LQ2VPA4 569 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 ZGRF1Q86YA3 2104 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 ST6GALNAC6Q969X2 333 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 UPK2O00526 184 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 APELAP0DMC3 54 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 CCL3L1P16619 93 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms