RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DNAH7Q8WXX0 4024 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 hCG_2014768A0A024R1R8 64 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 ANKRD20A5PA0PJZ0 165 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 CRYM-AS1A6NIL9 109 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 CEBPZOSA8MTT3 80 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 CORTO00230 105 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 GSTZ1O43708 216 aaPredicted RBP7.77□□□□□ -1.17
CAPN1-225ENST00000533704 CDS2O95674 445 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 AKR1C4P17516 323 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 FCGR2BP31994 310 aaPredicted RBP7.77□□□□□ -1.17
CAPN1-225ENST00000533704 SPCS3P61009 180 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 SURF2Q15527 256 aaPredicted RBP7.77□□□□□ -1.17
CAPN1-225ENST00000533704 ODF3L2Q3SX64 289 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 TOMM20LQ6UXN7 152 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 WFDC3Q8IUB2 231 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 FAM219AQ8IW50 185 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 GLYATL2Q8WU03 294 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 GPR146Q96CH1 333 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 ZNF414Q96IQ9 312 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 SLIRPQ9GZT3 109 aaKnown RBP7.77□□□□□ -1.17
CAPN1-225ENST00000533704 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.77□□□□□ -1.17
CAPN1-225ENST00000533704 SCP2D1Q9UJQ7 156 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 GPR132Q9UNW8 380 aa7.77□□□□□ -1.17
CAPN1-225ENST00000533704 PUS1Q9Y606 427 aaKnown RBP eCLIP7.77□□□□□ -1.17
CAPN1-225ENST00000533704 TMEM50AO95807 157 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 BMI1P35226 326 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 APOC4P55056 127 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 RPL11P62913 178 aaKnown RBP7.76□□□□□ -1.17
CAPN1-225ENST00000533704 MLANAQ16655 118 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 DEFB135Q30KP9 77 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 PYDC2Q56P42 97 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 ZNF600Q6ZNG1 722 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 TCF24Q7RTU0 167 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 APRG1Q8IVJ8 170 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 ST8SIA2Q92186 375 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 OR10C1Q96KK4 312 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 SCGB3A2Q96PL1 93 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 MRPL36Q9P0J6 103 aaKnown RBP7.76□□□□□ -1.17
CAPN1-225ENST00000533704 KCNIP3Q9Y2W7 256 aa7.76□□□□□ -1.17
CAPN1-225ENST00000533704 AGRNO00468 2067 aa7.75□□□□□ -1.17
CAPN1-225ENST00000533704 A0A1B0GU03 582 aa7.75□□□□□ -1.17
CAPN1-225ENST00000533704 INS-IGF2F8WCM5 200 aa7.75□□□□□ -1.17
CAPN1-225ENST00000533704 SCGB2A1O75556 95 aa7.75□□□□□ -1.17
CAPN1-225ENST00000533704 APOHP02749 345 aaPredicted RBP7.75□□□□□ -1.17
CAPN1-225ENST00000533704 ZNF124Q15973 351 aa7.75□□□□□ -1.17
CAPN1-225ENST00000533704 TIGITQ495A1 244 aa7.75□□□□□ -1.17
CAPN1-225ENST00000533704 IL17DQ8TAD2 202 aa7.75□□□□□ -1.17
CAPN1-225ENST00000533704 TMEM230Q96A57 120 aa7.75□□□□□ -1.17
CAPN1-225ENST00000533704 OVOL2Q9BRP0 275 aa7.75□□□□□ -1.17
CAPN1-225ENST00000533704 RBM38Q9H0Z9 239 aaKnown RBP7.75□□□□□ -1.17
CAPN1-225ENST00000533704 FNDC4Q9H6D8 234 aaPredicted RBP7.75□□□□□ -1.17
CAPN1-225ENST00000533704 DYNC2H1Q8NCM8 4307 aaKnown RBP7.74□□□□□ -1.17
CAPN1-225ENST00000533704 LCE6AA0A183 80 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 RPS10-NUDT3A0A1W2PQS6 291 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 DNASE2O00115 360 aaPredicted RBP7.74□□□□□ -1.17
CAPN1-225ENST00000533704 SPRY2O43597 315 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 CLN5O75503 358 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 DFFBO76075 338 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 SULT1A3P0DMM9 295 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 SULT1A4P0DMN0 295 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 S100A5P33763 92 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 FAUP35544 74 aaKnown RBP7.74□□□□□ -1.17
CAPN1-225ENST00000533704 HTR2BP41595 481 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 PAFAH1B2P68402 229 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 TMEM187Q14656 261 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
CAPN1-225ENST00000533704 PVRIGQ6DKI7 326 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 TMED4Q7Z7H5 227 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 STPG3Q8N7X2 389 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 SLC24A4Q8NFF2 622 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 OR52E5Q8NH55 327 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 SOSTQ9BQB4 213 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 ZFAND3Q9H8U3 227 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 TMEM56-RWDD3S4R434 201 aa7.74□□□□□ -1.17
CAPN1-225ENST00000533704 IFNA10P01566 189 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 ANXA3P12429 323 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 NPPCP23582 126 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 RND2P52198 227 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 PMS2P11Q13670 270 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 BSXQ3C1V8 233 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 FAM90A2PQ658T7 463 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 LYZL2Q7Z4W2 148 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 LILRB2Q8N423 598 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 TOMM5Q8N4H5 51 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 OR4X1Q8NH49 305 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 GALNT14Q96FL9 552 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 ACY3Q96HD9 319 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 NARS2Q96I59 477 aaKnown RBP7.73□□□□□ -1.17
CAPN1-225ENST00000533704 METTL26Q96S19 204 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 TMEM231Q9H6L2 316 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 MAP6D1Q9H9H5 199 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 RABAC1Q9UI14 185 aa7.73□□□□□ -1.17
CAPN1-225ENST00000533704 TRAV30A0A087WSZ9 112 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 A0A0J9YWU9 116 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 A0A1W2PS18 150 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 ZNF701M0R085 212 aaPredicted RBP7.72□□□□□ -1.17
CAPN1-225ENST00000533704 UBE2CO00762 179 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 VAMP1P23763 118 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 NPY1RP25929 384 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 CMC4P56277 68 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms