RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 KIR2DL5BA0A0G2JN68 375 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 KIR2DL5BA0A0G2JPC4 375 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 A0A0G2JRQ6 117 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 SCGB2A1O75556 95 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 JTBO76095 146 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 DEFB135Q30KP9 77 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 Q6ZRM9 215 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 TCF24Q7RTU0 167 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 APRG1Q8IVJ8 170 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 KIR2DL5AQ8N109 375 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 GBGT1Q8N5D6 347 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 KIR2DL5BQ8NHK3 375 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 RSL24D1Q9UHA3 163 aaKnown RBP11.45□□□□□ -0.58
CPSF1-211ENST00000533492 GPR132Q9UNW8 380 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 KCNIP3Q9Y2W7 256 aa11.45□□□□□ -0.58
CPSF1-211ENST00000533492 DNASE2O00115 360 aaPredicted RBP11.44□□□□□ -0.58
CPSF1-211ENST00000533492 RPL5P46777 297 aaKnown RBP11.44□□□□□ -0.58
CPSF1-211ENST00000533492 RPL11P62913 178 aaKnown RBP11.44□□□□□ -0.58
CPSF1-211ENST00000533492 TMEM268Q5VZI3 342 aa11.44□□□□□ -0.58
CPSF1-211ENST00000533492 PVRIGQ6DKI7 326 aa11.44□□□□□ -0.58
CPSF1-211ENST00000533492 WFDC3Q8IUB2 231 aa11.44□□□□□ -0.58
CPSF1-211ENST00000533492 SELENOHQ8IZQ5 122 aaKnown RBP11.44□□□□□ -0.58
CPSF1-211ENST00000533492 OR51S1Q8NGJ8 323 aa11.44□□□□□ -0.58
CPSF1-211ENST00000533492 OR52E5Q8NH55 327 aa11.44□□□□□ -0.58
CPSF1-211ENST00000533492 TMEM230Q96A57 120 aa11.44□□□□□ -0.58
CPSF1-211ENST00000533492 SCGB3A2Q96PL1 93 aa11.44□□□□□ -0.58
CPSF1-211ENST00000533492 TMEM231Q9H6L2 316 aa11.44□□□□□ -0.58
CPSF1-211ENST00000533492 HEYLQ9NQ87 328 aaPredicted RBP11.44□□□□□ -0.58
CPSF1-211ENST00000533492 SCP2D1Q9UJQ7 156 aa11.44□□□□□ -0.58
CPSF1-211ENST00000533492 DYNC2H1Q8NCM8 4307 aaKnown RBP11.43□□□□□ -0.58
CPSF1-211ENST00000533492 IGHV3-66A0A0C4DH42 116 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 RPS10-NUDT3A0A1W2PQS6 291 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 FABP12A6NFH5 140 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 CRYM-AS1A6NIL9 109 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 CLN5O75503 358 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 NPPCP23582 126 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 HTR2BP41595 481 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 MLANAQ16655 118 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 FAM90A2PQ658T7 463 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 OR4X1Q8NH49 305 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 LHFPL5Q8TAF8 219 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 ST8SIA2Q92186 375 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 GPR146Q96CH1 333 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 FNDC4Q9H6D8 234 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-211ENST00000533492 MAP6D1Q9H9H5 199 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 MCUBQ9NWR8 336 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 CACNG5Q9UF02 275 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 STARD9Q9P2P6 4700 aa11.43□□□□□ -0.58
CPSF1-211ENST00000533492 TRAV30A0A087WSZ9 112 aa11.42□□□□□ -0.58
CPSF1-211ENST00000533492 A0A0J9YWU9 116 aa11.42□□□□□ -0.58
CPSF1-211ENST00000533492 A0A1B0GU03 582 aa11.42□□□□□ -0.58
CPSF1-211ENST00000533492 A0A1W2PS18 150 aa11.42□□□□□ -0.58
CPSF1-211ENST00000533492 ANKRD20A5PA0PJZ0 165 aa11.42□□□□□ -0.58
CPSF1-211ENST00000533492 CEBPZOSA8MTT3 80 aa11.42□□□□□ -0.58
CPSF1-211ENST00000533492 GSTZ1O43708 216 aaPredicted RBP11.42□□□□□ -0.58
CPSF1-211ENST00000533492 DFFBO76075 338 aa11.42□□□□□ -0.58
CPSF1-211ENST00000533492 APOHP02749 345 aaPredicted RBP11.42□□□□□ -0.58
CPSF1-211ENST00000533492 RNF183Q96D59 192 aa11.42□□□□□ -0.58
CPSF1-211ENST00000533492 VSIRQ9H7M9 311 aa11.42□□□□□ -0.58
CPSF1-211ENST00000533492 ZFAND3Q9H8U3 227 aa11.42□□□□□ -0.58
CPSF1-211ENST00000533492 CXorf65A6NEN9 183 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 TNFSF8P32971 234 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 ZNF124Q15973 351 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 BSXQ3C1V8 233 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 AARDQ4LEZ3 155 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 LYG2Q86SG7 212 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 LILRB2Q8N423 598 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 MCFD2Q8NI22 146 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 NARS2Q96I59 477 aaKnown RBP11.41□□□□□ -0.58
CPSF1-211ENST00000533492 METTL26Q96S19 204 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 SLIRPQ9GZT3 109 aaKnown RBP11.41□□□□□ -0.58
CPSF1-211ENST00000533492 CSTL1Q9H114 145 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 MS4A6AQ9H2W1 248 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 MRPL36Q9P0J6 103 aaKnown RBP11.41□□□□□ -0.58
CPSF1-211ENST00000533492 CACFD1Q9UGQ2 172 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 TMEM56-RWDD3S4R434 201 aa11.41□□□□□ -0.58
CPSF1-211ENST00000533492 MPTX1A8MV57 137 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 H3BMQ9 156 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 SULT1A3P0DMM9 295 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 SULT1A4P0DMN0 295 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 TNFRSF9Q07011 255 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 PMS2P11Q13670 270 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 TIGITQ495A1 244 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 C2orf83Q53S99 150 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 NOXA1Q86UR1 476 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 SLC24A4Q8NFF2 622 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 IL22RA2Q969J5 263 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 RABAC1Q9UI14 185 aa11.4□□□□□ -0.58
CPSF1-211ENST00000533492 NXPH3O95157 252 aa11.39□□□□□ -0.59
CPSF1-211ENST00000533492 SLC25A4P12235 298 aa11.39□□□□□ -0.59
CPSF1-211ENST00000533492 AKR1C4P17516 323 aa11.39□□□□□ -0.59
CPSF1-211ENST00000533492 TMEM187Q14656 261 aa11.39□□□□□ -0.59
CPSF1-211ENST00000533492 ETFRF1Q6IPR1 90 aa11.39□□□□□ -0.59
CPSF1-211ENST00000533492 TMEM217Q8N7C4 229 aa11.39□□□□□ -0.59
CPSF1-211ENST00000533492 RNASEH2CQ8TDP1 164 aaKnown RBP11.39□□□□□ -0.59
CPSF1-211ENST00000533492 Q8WTZ3 238 aa11.39□□□□□ -0.59
CPSF1-211ENST00000533492 SOSTQ9BQB4 213 aa11.39□□□□□ -0.59
CPSF1-211ENST00000533492 LYSTQ99698 3801 aa11.39□□□□□ -0.59
CPSF1-211ENST00000533492 TRAV2A0A0B4J234 112 aa11.38□□□□□ -0.59
CPSF1-211ENST00000533492 IGKV1-17P01599 117 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms