RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZBTB8BQ8NAP8 495 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-214ENST00000533209 UXS1Q8NBZ7 420 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 RNASEH2CQ8TDP1 164 aaKnown RBP9.13□□□□□ -0.95
SSBP3-214ENST00000533209 ZNF414Q96IQ9 312 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 OR4C12Q96R67 309 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 GAR1Q9NY12 217 aaKnown RBP9.13□□□□□ -0.95
SSBP3-214ENST00000533209 MRPL36Q9P0J6 103 aaKnown RBP9.13□□□□□ -0.95
SSBP3-214ENST00000533209 C15orf62A8K5M9 175 aa9.12□□□□□ -0.95
SSBP3-214ENST00000533209 WRBO00258 174 aa9.12□□□□□ -0.95
SSBP3-214ENST00000533209 PRAF2O60831 178 aa9.12□□□□□ -0.95
SSBP3-214ENST00000533209 OPRK1P41145 380 aa9.12□□□□□ -0.95
SSBP3-214ENST00000533209 NKX2-1P43699 371 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-214ENST00000533209 ATP5IP56385 69 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-214ENST00000533209 UNQ9165/PRO28630Q6UXU0 137 aa9.12□□□□□ -0.95
SSBP3-214ENST00000533209 NOXA1Q86UR1 476 aa9.12□□□□□ -0.95
SSBP3-214ENST00000533209 CIB3Q96Q77 187 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-214ENST00000533209 ZNF436Q9C0F3 470 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-214ENST00000533209 GPN1Q9HCN4 374 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-214ENST00000533209 SIGLEC8Q9NYZ4 499 aa9.12□□□□□ -0.95
SSBP3-214ENST00000533209 DNAH3Q8TD57 4116 aa9.12□□□□□ -0.95
SSBP3-214ENST00000533209 RPS10-NUDT3A0A1W2PQS6 291 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 ZNF320A2RRD8 509 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 SNRPGP15A8MWD9 76 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 A8MWP6 167 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 NDUFA4O00483 81 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 GNG7O60262 68 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 TMEM50AO95807 157 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 IGLV1-51P01701 117 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 EDN2P20800 178 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 NPBWR1P48145 328 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 POLR2GP62487 172 aaKnown RBP eCLIP9.11□□□□□ -0.95
SSBP3-214ENST00000533209 OR4X1Q8NH49 305 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 PALMDQ9NP74 551 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 AURKAIP1Q9NWT8 199 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-214ENST00000533209 GSKIPQ9P0R6 139 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 PEMTQ9UBM1 199 aa9.11□□□□□ -0.95
SSBP3-214ENST00000533209 TMEM213A2RRL7 107 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 C5orf51A6NDU8 294 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 C2orf70A6NJV1 201 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 FAM25EA8MYX2 175 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 NUPL2O15504 423 aaKnown RBP9.1□□□□□ -0.95
SSBP3-214ENST00000533209 CLN5O75503 358 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 LY86O95711 162 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 PTTG1O95997 202 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 MBPP02686 304 aaPredicted RBP9.1□□□□□ -0.95
SSBP3-214ENST00000533209 IFNA4P05014 189 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 SLC25A4P12235 298 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 CD69Q07108 199 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 TM4SF20Q53R12 229 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 PRSS54Q6PEW0 395 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 HAPLN4Q86UW8 402 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 TMEM116Q8NCL8 245 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 TMEM190Q8WZ59 177 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 C2orf50Q96LR7 162 aa9.1□□□□□ -0.95
SSBP3-214ENST00000533209 ZMAT5Q9UDW3 170 aaKnown RBP9.1□□□□□ -0.95
SSBP3-214ENST00000533209 SSSCA1O60232 199 aa9.09□□□□□ -0.95
SSBP3-214ENST00000533209 SCGB1D2O95969 90 aa9.09□□□□□ -0.95
SSBP3-214ENST00000533209 FOLR2P14207 255 aa9.09□□□□□ -0.95
SSBP3-214ENST00000533209 RND2P52198 227 aa9.09□□□□□ -0.95
SSBP3-214ENST00000533209 PAX9P55771 341 aa9.09□□□□□ -0.95
SSBP3-214ENST00000533209 RELQ04864 619 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-214ENST00000533209 IL15RAQ13261 267 aa9.09□□□□□ -0.95
SSBP3-214ENST00000533209 ETFRF1Q6IPR1 90 aa9.09□□□□□ -0.95
SSBP3-214ENST00000533209 SLC16A13Q7RTY0 426 aa9.09□□□□□ -0.95
SSBP3-214ENST00000533209 CACNG8Q8WXS5 425 aa9.09□□□□□ -0.95
SSBP3-214ENST00000533209 RCL1Q9Y2P8 373 aaKnown RBP9.09□□□□□ -0.95
SSBP3-214ENST00000533209 UFC1Q9Y3C8 167 aa9.09□□□□□ -0.95
SSBP3-214ENST00000533209 WI2-2373I1.2A0A1W2PRP0 233 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 PRSS46E5RG02 174 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 H3BP45 60 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 IGKV1-17P01599 117 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 C8orf88P0DMB2 117 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 CBLN1P23435 193 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 ELLP55199 621 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-214ENST00000533209 RAB11AP62491 216 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 RPP30P78346 268 aaKnown RBP9.08□□□□□ -0.96
SSBP3-214ENST00000533209 DCTN2Q13561 401 aaKnown RBP9.08□□□□□ -0.96
SSBP3-214ENST00000533209 SPANXN5Q5MJ07 72 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 GSG1LQ6UXU4 331 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 NPIPB3Q92617 1050 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 SMIM8Q96KF7 97 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 PRR25Q96S07 402 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 RAB40CQ96S21 281 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 PSENENQ9NZ42 101 aa9.08□□□□□ -0.96
SSBP3-214ENST00000533209 PAIP2BQ9ULR5 123 aaKnown RBP9.08□□□□□ -0.96
SSBP3-214ENST00000533209 ZNF256Q9Y2P7 627 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-214ENST00000533209 STRAPQ9Y3F4 350 aaKnown RBP9.08□□□□□ -0.96
SSBP3-214ENST00000533209 IGHV3OR16-8A0A075B7F1 116 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 TRAV30A0A087WSZ9 112 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 C7orf66A4D0T2 115 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 K7EIL1 84 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 K7EMT4 169 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 K7EPK0 472 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 GOSR2O14653 212 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 SIX6O95475 246 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 IGLC1P0CG04 106 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 OR10J1P30954 320 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 GPX4P36969 197 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-214ENST00000533209 TAS2R30P59541 319 aa9.07□□□□□ -0.96
SSBP3-214ENST00000533209 GAMTQ14353 236 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms