RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ZNF362Q5T0B9 420 aaPredicted RBP12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 Q9H3A6 140 aa12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 FABP5P3A8MUU1 101 aa12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 SRRM5B3KS81 715 aa12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 CFAP161Q6P656 301 aa12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 FER1L6-AS1Q8NA97 138 aa12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 NEUROG1Q92886 237 aa12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 PMCHL2Q9BQD1 86 aa12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 IGKV1D-13A0A0B4J2D9 117 aa12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 IGKV1-13P0DP09 117 aa12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 PSMG4Q5JS54 123 aa12.28□□□□□ -0.44
PCDHA9-202ENST00000532602 A0A0A6YYD4 124 aa12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 C1QTNF9BB2RNN3 333 aa12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 LY6HO94772 140 aa12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 C1QTNF9P0C862 333 aa12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 CDX1P47902 265 aaPredicted RBP12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 MINOS1Q5TGZ0 78 aa12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 NR2C2APQ86WQ0 139 aa12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 RPP21Q9H633 154 aaKnown RBP12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 MINOS1-NBL1R4GNA1 71 aa12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 MARVELD3Q96A59 401 aa12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 ZNF414Q96IQ9 312 aa12.27□□□□□ -0.44
PCDHA9-202ENST00000532602 C5orf63A6NC05 138 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 FAM90A9PA6NNJ1 464 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 TGIF2-C20orf24A0A0A6YYL0 155 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 MUC21A0A0G2JKD1 596 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 MUC21A0A140T8X8 626 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 K7ERU9 68 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 MUC21Q5SSG8 566 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 LHFPL4Q7Z7J7 247 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 CACNA1BQ00975 2339 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 CD5P06127 495 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 GAS1P54826 345 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 DTX2Q86UW9 622 aa12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 SDHCQ99643 169 aaPredicted RBP12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.45
PCDHA9-202ENST00000532602 TRAV41A0A0B4J266 112 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 CYB5R2Q6BCY4 276 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 NABP1Q96AH0 204 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 MYLKQ15746 1914 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 LILRA1O75019 489 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 SLC25A16P16260 332 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 CRYGSP22914 178 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 ZP1P60852 638 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 PRCDQ00LT1 54 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 PAX8Q06710 450 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 Q6ZS92 163 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 TMEM219Q86XT9 240 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 NLRC5Q86WI3 1866 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 VMO1Q7Z5L0 202 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 GLMPQ8WWB7 406 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 SCGB3A1Q96QR1 104 aa12.26□□□□□ -0.45
PCDHA9-202ENST00000532602 TRAV21A0A0B4J279 112 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 GAGE10A6NGK3 116 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 IL36BQ9NZH7 164 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 HEPN1Q6WQI6 88 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 ZNF525Q8N782 197 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 RNF5Q99942 180 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 ZNF257Q9Y2Q1 563 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 CD7P09564 240 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 MIR17HGQ75NE6 70 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 TMEM190Q8WZ59 177 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 FANCMQ8IYD8 2048 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 PTPRDP23468 1912 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 HEATR5BQ9P2D3 2071 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 TRGV11A0A075B6L2 103 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 TDGF1P13385 188 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 GCSAMLQ5JQS6 135 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 DOCK8Q8NF50 2099 aa12.25□□□□□ -0.45
PCDHA9-202ENST00000532602 MBD3L4A6NDZ8 208 aaPredicted RBP12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 MBD3L3A6NE82 208 aaPredicted RBP12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 MBD3L5A6NJ08 208 aaPredicted RBP12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 HOXA5P20719 270 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 DUTP33316 252 aaKnown RBP12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 FAM89BQ8N5H3 189 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 MBD3L2Q8NHZ7 208 aaPredicted RBP12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 SLC25A15Q9Y619 301 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 SRD5A1P18405 259 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 FOXA3P55318 350 aaPredicted RBP12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 TCF23Q7RTU1 214 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 C5orf24Q7Z6I8 188 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 BIVMQ86UB2 503 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 TRAV9-1A0A075B6T8 112 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 GHRHP01286 108 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 ARL6IP6Q8N6S5 226 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 TMEM183AQ8IXX5 376 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 OVOL1O14753 267 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 NHLRC3Q5JS37 347 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 ORMDL3Q8N138 153 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 WFDC12Q8WWY7 111 aa12.24□□□□□ -0.45
PCDHA9-202ENST00000532602 IGHV2-26A0A0B4J1V2 119 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 TMEM160Q9NX00 188 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 CRIM1Q9NZV1 1036 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 GRIFINA4D1Z8 144 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 OR5AN1Q8NGI8 311 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 TOMM7Q9P0U1 55 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 TRGV4A0A0C4DH28 118 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 LY6G6EA0A0G2JKS1 128 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 U3KQA8 63 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 TMEM178BH3BS89 294 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms