RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 DOCK10Q96BY6 2186 aa5.69□□□□□ -1.5
TGFBR3-209ENST00000532540 C3orf80F5H4A9 247 aa5.69□□□□□ -1.5
TGFBR3-209ENST00000532540 SYS1-DBNDD2H3BUS1 97 aa5.69□□□□□ -1.5
TGFBR3-209ENST00000532540 P01737 135 aa5.69□□□□□ -1.5
TGFBR3-209ENST00000532540 RBM11P57052 281 aaKnown RBP5.69□□□□□ -1.5
TGFBR3-209ENST00000532540 MIC13Q5XKP0 118 aa5.69□□□□□ -1.5
TGFBR3-209ENST00000532540 ZDHHC23Q8IYP9 409 aa5.69□□□□□ -1.5
TGFBR3-209ENST00000532540 SMIM20Q8N5G0 67 aa5.69□□□□□ -1.5
TGFBR3-209ENST00000532540 ANAPC10Q9UM13 185 aa5.69□□□□□ -1.5
TGFBR3-209ENST00000532540 F2Z2F3 143 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 SRD5A2P31213 254 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 CX3CL1P78423 397 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 TFF3Q07654 80 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 BOD1L2Q8IYS8 172 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 OR4A5Q8NH83 315 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 RNASE7Q9H1E1 156 aaKnown RBP5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 MS4A5Q9H3V2 200 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 NHP2Q9NX24 153 aaKnown RBP5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 USP9XQ93008 2570 aaPredicted RBP5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 B5MCH6 92 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 CA6P23280 308 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 SSTR5P35346 364 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 IGLV3-21P80748 117 aaPredicted RBP5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 ZP4Q12836 540 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 FHL1Q13642 323 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 ZNF726P1Q15940 193 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 ETDBQ3ZM63 59 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 HAPLN4Q86UW8 402 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 FGFRL1Q8N441 504 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 RPRMLQ8N4K4 120 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 KCNK17Q96T54 332 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 ZNF391Q9UJN7 358 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 WIPF3A6NGB9 483 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 DNPH1O43598 174 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 SLC25A5P05141 298 aaKnown RBP5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 MEF2CQ06413 473 aaPredicted RBP5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 GAGE2BQ13066 116 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 GAGE2EQ4V326 116 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 ZNF479Q96JC4 524 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 COMMD5Q9GZQ3 224 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 ZNF355PQ9NSJ1 428 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 GAGE2DQ9UEU5 116 aa5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 SOX21Q9Y651 276 aaPredicted RBP5.68□□□□□ -1.5
TGFBR3-209ENST00000532540 A0A1W2PRE2 83 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 LRRC30A6NM36 301 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 HBBP68871 147 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 RIGQ13278 110 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 NMSQ5H8A3 153 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 TEPPQ6URK8 271 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 LHFPL6Q9Y693 200 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 TMEM262E9PQX1 116 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 K7ENP7 123 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 M0R1B8 84 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 COX7A2P2O60397 106 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 ZG16O60844 167 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 TMEM50AO95807 157 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 IFI6P09912 130 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 CT45A10P0DMU9 189 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 HERV-K104P63124 156 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 INO80CQ6PI98 192 aaPredicted RBP5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 HIST1H4GQ99525 98 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 NPFFR1Q9GZQ6 430 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 NPVFQ9HCQ7 196 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 PROCRQ9UNN8 238 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 ATP23Q9Y6H3 246 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 LOC102723996A0A087X1L8 192 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 A0A1W2PPM0 123 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 PPP1R35Q8TAP8 253 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 C18orf32Q8TCD1 76 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 CHCHD1Q96BP2 118 aaKnown RBP5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 GALMQ96C23 342 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 IL36GQ9NZH8 169 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 HEATR1Q9H583 2144 aaKnown RBP5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 IL4P05112 153 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 OR9G9P0C7N8 305 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 IGFBP2P18065 325 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 COL8A1P27658 744 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 STPG3Q8N7X2 389 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 FAM222BQ8WU58 562 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 NEUROG1Q92886 237 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 SRXN1Q9BYN0 137 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 PLXNB3Q9ULL4 1909 aa5.67□□□□□ -1.5
TGFBR3-209ENST00000532540 FREM1Q5H8C1 2179 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 ZFHX4Q86UP3 3567 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 SAA2-SAA4A0A096LPE2 208 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 IGKV1-9A0A0C4DH69 117 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 A6NJY4 79 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 RPL13AP40429 203 aaKnown RBP5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 SUMO3P55854 103 aaPredicted RBP5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 ARL16Q0P5N6 197 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 GUSBP1Q15486 140 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 TTC9CQ8N5M4 171 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 ZIC4Q8N9L1 334 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 TMEM116Q8NCL8 245 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 ZNF524Q96C55 264 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 ZNF414Q96IQ9 312 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 RCHY1Q96PM5 261 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 SFXN3Q9BWM7 321 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 SPANXA1Q9NS26 97 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms