RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 KNCNA6PVL3 124 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 K7EIM0 57 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 GPR31O00270 319 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 CD3DP04234 171 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 CTSGP08311 255 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 RCVRNP35243 200 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 RPL5P46777 297 aaKnown RBP6.46□□□□□ -1.38
USF1-210ENST00000531842 TMBIM6P55061 237 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 MFAP4P55083 255 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 TCTAP57738 103 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.38
USF1-210ENST00000531842 PAFAH1B2P68402 229 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 C12orf74Q32Q52 190 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 H2BFWTQ7Z2G1 175 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 RAB2BQ8WUD1 216 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 PINX1Q96BK5 328 aaKnown RBP6.46□□□□□ -1.38
USF1-210ENST00000531842 ATP6V0BQ99437 205 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 NXF2Q9GZY0 626 aaKnown RBP6.46□□□□□ -1.38
USF1-210ENST00000531842 DMBT1Q9UGM3 2413 aaPredicted RBP6.45□□□□□ -1.38
USF1-210ENST00000531842 DEFB131BA0A096LNP1 70 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 FAM25AB3EWG3 89 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 FAM25CB3EWG5 89 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 FAM25GB3EWG6 89 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 C11orf94C9JXX5 98 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 DNASE2O00115 360 aaPredicted RBP6.45□□□□□ -1.38
USF1-210ENST00000531842 GNG7O60262 68 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 CD74P04233 296 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 PI3P19957 117 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 UCP3P55916 312 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 FAM90A2PQ658T7 463 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 PVRIGQ6DKI7 326 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 FAAP20Q6NZ36 180 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 LPCAT3Q6P1A2 487 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 MZT2AQ6P582 158 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 OR1P1Q8NH06 330 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 ST8SIA2Q92186 375 aa6.45□□□□□ -1.38
USF1-210ENST00000531842 CCDC59Q9P031 241 aaKnown RBP6.45□□□□□ -1.38
USF1-210ENST00000531842 SMIM31A0A1B0GVY4 71 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 C15orf61A6NNL5 157 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 MT-CO2P00403 227 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 P0C879 139 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 SNCAP37840 140 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 ERHP84090 104 aaKnown RBP6.44□□□□□ -1.38
USF1-210ENST00000531842 TNP2Q05952 138 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 Q6ZR54 194 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 TCF24Q7RTU0 167 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 TBC1D26Q86UD7 250 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 CADM3Q8N126 398 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 AP3S1Q92572 193 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 SEC22AQ96IW7 307 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 TXN2Q99757 166 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 BCL7BQ9BQE9 202 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 GINS3Q9BRX5 216 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 RNF126Q9BV68 326 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 MS4A6AQ9H2W1 248 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 TMEM14BQ9NUH8 114 aa6.44□□□□□ -1.38
USF1-210ENST00000531842 C16orf90A8MZG2 172 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 GABARAPH6UMI1 98 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 I3L2K1 104 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 DFFBO76075 338 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 AMBPP02760 352 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 CD5P06127 495 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 TNFSF8P32971 234 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 NPBWR1P48145 328 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 HSPE1P61604 102 aaKnown RBP6.43□□□□□ -1.38
USF1-210ENST00000531842 IZUMO4Q1ZYL8 232 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 Q6ZRM9 215 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 TMEM229BQ8NBD8 167 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 DUSP18Q8NEJ0 188 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 SMIM4Q8WVI0 70 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 TP53RKQ96S44 253 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 RTBDNQ9BSG5 229 aaPredicted RBP6.43□□□□□ -1.38
USF1-210ENST00000531842 HRH4Q9H3N8 390 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 DNAH5Q8TE73 4624 aa6.43□□□□□ -1.38
USF1-210ENST00000531842 A0A0G2JRQ6 117 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 CTDSPLO15194 276 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 RGS5O15539 181 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 ST8SIA3O43173 380 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 IFNA17P01571 189 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 IGKV1-5P01602 117 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 P0DMU3 169 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 FAM231AP0DMU4 169 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 FAM231CP0DMU5 169 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 PGAM2P15259 253 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 RND3P61587 244 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 PRCDQ00LT1 54 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 LGALS9BQ3B8N2 356 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 SPINK9Q5DT21 86 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 TOMM20LQ6UXN7 152 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 GSG1LQ6UXU4 331 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 TRPT1Q86TN4 253 aaKnown RBP6.42□□□□□ -1.38
USF1-210ENST00000531842 STHQ8IWL8 128 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 CENPSQ8N2Z9 138 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 OR13C8Q8NGS7 320 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 OR10C1Q96KK4 312 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 RABAC1Q9UI14 185 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 V9GYH0 126 aa6.42□□□□□ -1.38
USF1-210ENST00000531842 A0A0B4J293 547 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 ZNF705EA8MWA4 302 aaPredicted RBP6.41□□□□□ -1.38
USF1-210ENST00000531842 IFNA10P01566 189 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms