RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SUB1P53999 127 aaKnown RBP eCLIP11.11□□□□□ -0.63
CPSF1-206ENST00000531480 LRRC37A5PQ49AS3 106 aa11.11□□□□□ -0.63
CPSF1-206ENST00000531480 ACOT7LQ6ZUV0 252 aa11.11□□□□□ -0.63
CPSF1-206ENST00000531480 DTD1Q8TEA8 209 aa11.11□□□□□ -0.63
CPSF1-206ENST00000531480 SCARB1Q8WTV0 552 aa11.11□□□□□ -0.63
CPSF1-206ENST00000531480 DCUN1D4Q92564 292 aa11.11□□□□□ -0.63
CPSF1-206ENST00000531480 EEF1AKMT3Q96AZ1 226 aa11.11□□□□□ -0.63
CPSF1-206ENST00000531480 U3KQ87 197 aa11.11□□□□□ -0.63
CPSF1-206ENST00000531480 NOTCH1P46531 2555 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 CEBPZOSA8MTT3 80 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 K7EPK0 472 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 CORTO00230 105 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 TAAR5O14804 337 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 DEDDO75618 318 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 HOXD3P31249 432 aaPredicted RBP11.1□□□□□ -0.63
CPSF1-206ENST00000531480 P2RY1P47900 373 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 AP2S1P53680 142 aaPredicted RBP11.1□□□□□ -0.63
CPSF1-206ENST00000531480 IL15RAQ13261 267 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 KLF5Q13887 457 aaPredicted RBP11.1□□□□□ -0.63
CPSF1-206ENST00000531480 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 DPF1Q92782 380 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 DLX4Q92988 240 aaPredicted RBP11.1□□□□□ -0.63
CPSF1-206ENST00000531480 WDR89Q96FK6 387 aaPredicted RBP11.1□□□□□ -0.63
CPSF1-206ENST00000531480 RCC1LQ96I51 464 aaKnown RBP11.1□□□□□ -0.63
CPSF1-206ENST00000531480 MFFQ9GZY8 342 aa11.1□□□□□ -0.63
CPSF1-206ENST00000531480 HEYLQ9NQ87 328 aaPredicted RBP11.1□□□□□ -0.63
CPSF1-206ENST00000531480 LSM5Q9Y4Y9 91 aaKnown RBP11.1□□□□□ -0.63
CPSF1-206ENST00000531480 KANTRA0A1W2PQU2 76 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 ANKRD34BA5PLL1 514 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 SYNGR2O43760 224 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 NXPH3O95157 252 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 LYL1P12980 280 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 CD33P20138 364 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 SLURP1P55000 103 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 RAB32Q13637 225 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 ZNF345Q14585 488 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 SAMD5Q5TGI4 173 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 STX12Q86Y82 276 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 RNASEH2CQ8TDP1 164 aaKnown RBP11.09□□□□□ -0.63
CPSF1-206ENST00000531480 TXN2Q99757 166 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 FNDC4Q9H6D8 234 aaPredicted RBP11.09□□□□□ -0.63
CPSF1-206ENST00000531480 C21orf62Q9NYP8 219 aa11.09□□□□□ -0.63
CPSF1-206ENST00000531480 MT-CO2P00403 227 aa11.08□□□□□ -0.64
CPSF1-206ENST00000531480 MBPP02686 304 aaPredicted RBP11.08□□□□□ -0.64
CPSF1-206ENST00000531480 NPY1RP25929 384 aa11.08□□□□□ -0.64
CPSF1-206ENST00000531480 BAXQ07812 192 aa11.08□□□□□ -0.64
CPSF1-206ENST00000531480 GPHB5Q86YW7 130 aa11.08□□□□□ -0.64
CPSF1-206ENST00000531480 ZNF414Q96IQ9 312 aa11.08□□□□□ -0.64
CPSF1-206ENST00000531480 SMIM8Q96KF7 97 aa11.08□□□□□ -0.64
CPSF1-206ENST00000531480 MCRIP2Q9BUT9 160 aaKnown RBP11.08□□□□□ -0.64
CPSF1-206ENST00000531480 MBD2Q9UBB5 411 aa11.08□□□□□ -0.64
CPSF1-206ENST00000531480 BOLA2-SMG1P6H3BVE0 249 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 ARPC5O15511 151 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 TSC22D2O75157 780 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 GGCTO75223 188 aaKnown RBP11.07□□□□□ -0.64
CPSF1-206ENST00000531480 IGHV3-23P01764 117 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 CLEC3BP05452 202 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 S100A11P31949 105 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 ARL3P36405 182 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 RAB11AP62491 216 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 HBG1P69891 147 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 HBG2P69892 147 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 DEFA6Q01524 100 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 KPRPQ5T749 579 aaPredicted RBP11.07□□□□□ -0.64
CPSF1-206ENST00000531480 EIF5AL1Q6IS14 154 aaKnown RBP11.07□□□□□ -0.64
CPSF1-206ENST00000531480 SPSB3Q6PJ21 355 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 CLEC19AQ6UXS0 136 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 MISP3Q96FF7 219 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 BSCL2Q96G97 398 aaPredicted RBP11.07□□□□□ -0.64
CPSF1-206ENST00000531480 HSPB11Q9Y547 144 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 S4R3C0 116 aa11.07□□□□□ -0.64
CPSF1-206ENST00000531480 C15orf62A8K5M9 175 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 PPP5D1E7EU14 171 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 LGALS9O00182 355 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 OVOL1O14753 267 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 TGOLN2O43493 480 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 TMEM50AO95807 157 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 CTSGP08311 255 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 RPL12P30050 165 aaKnown RBP11.06□□□□□ -0.64
CPSF1-206ENST00000531480 ADMP35318 185 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 RPEL1Q2QD12 228 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 ACSM6Q6P461 480 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 C1QL4Q86Z23 238 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 AQP10Q96PS8 301 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 MAGT1Q9H0U3 335 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 GAR1Q9NY12 217 aaKnown RBP11.06□□□□□ -0.64
CPSF1-206ENST00000531480 TNFSF18Q9UNG2 199 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 RCL1Q9Y2P8 373 aaKnown RBP11.06□□□□□ -0.64
CPSF1-206ENST00000531480 MEGF8Q7Z7M0 2845 aa11.06□□□□□ -0.64
CPSF1-206ENST00000531480 BORCS7-ASMTA0A0B4J1R7 106 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 PRSS46E5RG02 174 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 SMLR1H3BR10 107 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 SSSCA1O60232 199 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 IFNA10P01566 189 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 IGLL1P15814 213 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 GPR183P32249 361 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 CAV2P51636 162 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 MFAP4P55083 255 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 PAX9P55771 341 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 POLR2GP62487 172 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms