RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 HOXA1P49639 335 aaPredicted RBP11.59□□□□□ -0.55
CPSF1-205ENST00000531042 TAS2R19P59542 299 aa11.59□□□□□ -0.55
CPSF1-205ENST00000531042 SCGB2B2Q4G0G5 96 aa11.59□□□□□ -0.55
CPSF1-205ENST00000531042 MARCH1Q8TCQ1 289 aa11.59□□□□□ -0.55
CPSF1-205ENST00000531042 RRNAD1Q96FB5 475 aaKnown RBP11.59□□□□□ -0.55
CPSF1-205ENST00000531042 RARRES2Q99969 163 aa11.59□□□□□ -0.55
CPSF1-205ENST00000531042 MS4A6AQ9H2W1 248 aa11.59□□□□□ -0.55
CPSF1-205ENST00000531042 KLK5Q9Y337 293 aaPredicted RBP11.59□□□□□ -0.55
CPSF1-205ENST00000531042 IGHV3-66A0A0C4DH42 116 aa11.58□□□□□ -0.56
CPSF1-205ENST00000531042 DNASE2O00115 360 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-205ENST00000531042 B3GALNT1O75752 331 aa11.58□□□□□ -0.56
CPSF1-205ENST00000531042 RAB3DO95716 219 aa11.58□□□□□ -0.56
CPSF1-205ENST00000531042 MLANAQ16655 118 aa11.58□□□□□ -0.56
CPSF1-205ENST00000531042 GPR107Q5VW38 600 aa11.58□□□□□ -0.56
CPSF1-205ENST00000531042 STEAP1BQ6NZ63 245 aa11.58□□□□□ -0.56
CPSF1-205ENST00000531042 MIXL1Q9H2W2 232 aa11.58□□□□□ -0.56
CPSF1-205ENST00000531042 FNDC4Q9H6D8 234 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-205ENST00000531042 ENY2Q9NPA8 101 aa11.58□□□□□ -0.56
CPSF1-205ENST00000531042 MRPL36Q9P0J6 103 aaKnown RBP11.58□□□□□ -0.56
CPSF1-205ENST00000531042 TRAV2A0A0B4J234 112 aa11.57□□□□□ -0.56
CPSF1-205ENST00000531042 GABARAPH6UMI1 98 aa11.57□□□□□ -0.56
CPSF1-205ENST00000531042 CLN5O75503 358 aa11.57□□□□□ -0.56
CPSF1-205ENST00000531042 NPPCP23582 126 aa11.57□□□□□ -0.56
CPSF1-205ENST00000531042 OPRK1P41145 380 aa11.57□□□□□ -0.56
CPSF1-205ENST00000531042 RPL11P62913 178 aaKnown RBP11.57□□□□□ -0.56
CPSF1-205ENST00000531042 BSXQ3C1V8 233 aa11.57□□□□□ -0.56
CPSF1-205ENST00000531042 Q6ZRM9 215 aa11.57□□□□□ -0.56
CPSF1-205ENST00000531042 OR4X1Q8NH49 305 aa11.57□□□□□ -0.56
CPSF1-205ENST00000531042 RNASE11Q8TAA1 199 aaKnown RBP11.57□□□□□ -0.56
CPSF1-205ENST00000531042 PHLDA1Q8WV24 401 aaPredicted RBP11.57□□□□□ -0.56
CPSF1-205ENST00000531042 TMEM222Q9H0R3 208 aa11.57□□□□□ -0.56
CPSF1-205ENST00000531042 RBM38Q9H0Z9 239 aaKnown RBP11.57□□□□□ -0.56
CPSF1-205ENST00000531042 TMEM231Q9H6L2 316 aa11.57□□□□□ -0.56
CPSF1-205ENST00000531042 CDS2O95674 445 aa11.56□□□□□ -0.56
CPSF1-205ENST00000531042 DEFB131AP59861 70 aa11.56□□□□□ -0.56
CPSF1-205ENST00000531042 SPCS3P61009 180 aa11.56□□□□□ -0.56
CPSF1-205ENST00000531042 SSBP1Q04837 148 aaKnown RBP11.56□□□□□ -0.56
CPSF1-205ENST00000531042 AARDQ4LEZ3 155 aa11.56□□□□□ -0.56
CPSF1-205ENST00000531042 LEMD1Q68G75 181 aa11.56□□□□□ -0.56
CPSF1-205ENST00000531042 FAM219AQ8IW50 185 aa11.56□□□□□ -0.56
CPSF1-205ENST00000531042 FAM24BQ8N5W8 94 aa11.56□□□□□ -0.56
CPSF1-205ENST00000531042 OR11H2Q8NH07 326 aa11.56□□□□□ -0.56
CPSF1-205ENST00000531042 RTBDNQ9BSG5 229 aaPredicted RBP11.56□□□□□ -0.56
CPSF1-205ENST00000531042 KMT2AQ03164 3969 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 A0A1W2PS18 150 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 ZNF701M0R085 212 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-205ENST00000531042 CTDSP2O14595 271 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 RGS5O15539 181 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 CA1P00915 261 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-205ENST00000531042 OR5AC1P0C628 307 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 CRYBB3P26998 211 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 MRPS10P82664 201 aaKnown RBP11.55□□□□□ -0.56
CPSF1-205ENST00000531042 MEF2DQ14814 521 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 FAAP20Q6NZ36 180 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 OR52E5Q8NH55 327 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 LHFPL5Q8TAF8 219 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 GLYATL2Q8WU03 294 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 C11orf68Q9H3H3 251 aaKnown RBP11.55□□□□□ -0.56
CPSF1-205ENST00000531042 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-205ENST00000531042 RABAC1Q9UI14 185 aa11.55□□□□□ -0.56
CPSF1-205ENST00000531042 C14orf166Q9Y224 244 aaKnown RBP11.55□□□□□ -0.56
CPSF1-205ENST00000531042 TEX13DA0A0J9YY54 714 aaPredicted RBP11.54□□□□□ -0.56
CPSF1-205ENST00000531042 SCGB2A1O75556 95 aa11.54□□□□□ -0.56
CPSF1-205ENST00000531042 IGKV1-17P01599 117 aa11.54□□□□□ -0.56
CPSF1-205ENST00000531042 HTR2BP41595 481 aa11.54□□□□□ -0.56
CPSF1-205ENST00000531042 CNPY1Q3B7I2 92 aa11.54□□□□□ -0.56
CPSF1-205ENST00000531042 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
CPSF1-205ENST00000531042 SELENOHQ8IZQ5 122 aaKnown RBP11.54□□□□□ -0.56
CPSF1-205ENST00000531042 RBPMSQ93062 196 aaKnown RBP11.54□□□□□ -0.56
CPSF1-205ENST00000531042 TMEM230Q96A57 120 aa11.54□□□□□ -0.56
CPSF1-205ENST00000531042 METTL26Q96S19 204 aa11.54□□□□□ -0.56
CPSF1-205ENST00000531042 NAA60Q9H7X0 242 aa11.54□□□□□ -0.56
CPSF1-205ENST00000531042 TRAV30A0A087WSZ9 112 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 DISC1C4P0D8 188 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 K7EQG2 157 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 P2RY1P47900 373 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 NANOS2P60321 138 aaKnown RBP11.53□□□□□ -0.56
CPSF1-205ENST00000531042 DHODHQ02127 395 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 TMEM187Q14656 261 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 SPCS2Q15005 226 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 SURF2Q15527 256 aaPredicted RBP11.53□□□□□ -0.56
CPSF1-205ENST00000531042 TIGITQ495A1 244 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 C11orf45Q8TAV5 145 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 SMIM4Q8WVI0 70 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 GPR146Q96CH1 333 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 PTTG2Q9NZH5 202 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 GPR132Q9UNW8 380 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 FRAS1Q86XX4 4008 aa11.53□□□□□ -0.56
CPSF1-205ENST00000531042 RPS10-NUDT3A0A1W2PQS6 291 aa11.52□□□□□ -0.57
CPSF1-205ENST00000531042 AKAIN1P0CW23 69 aa11.52□□□□□ -0.57
CPSF1-205ENST00000531042 C2orf83Q53S99 150 aa11.52□□□□□ -0.57
CPSF1-205ENST00000531042 STHQ8IWL8 128 aa11.52□□□□□ -0.57
CPSF1-205ENST00000531042 STXBP6Q8NFX7 210 aa11.52□□□□□ -0.57
CPSF1-205ENST00000531042 OR4C16Q8NGL9 310 aa11.52□□□□□ -0.57
CPSF1-205ENST00000531042 GRAMD2BQ96HH9 432 aa11.52□□□□□ -0.57
CPSF1-205ENST00000531042 MFFQ9GZY8 342 aa11.52□□□□□ -0.57
CPSF1-205ENST00000531042 HEYLQ9NQ87 328 aaPredicted RBP11.52□□□□□ -0.57
CPSF1-205ENST00000531042 CACNG5Q9UF02 275 aa11.52□□□□□ -0.57
CPSF1-205ENST00000531042 CRYM-AS1A6NIL9 109 aa11.51□□□□□ -0.57
CPSF1-205ENST00000531042 CTDSPLO15194 276 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms