RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 Q8NAQ8 132 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 TMEM230Q96A57 120 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 YIPF6Q96EC8 236 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 TMEM50AO95807 157 aa11.52□□□□□ -0.57
CHMP4A-204ENST00000530996 SPP1P10451 314 aa11.52□□□□□ -0.57
CHMP4A-204ENST00000530996 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.57
CHMP4A-204ENST00000530996 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.57
CHMP4A-204ENST00000530996 MORN3Q6PF18 240 aaPredicted RBP11.52□□□□□ -0.57
CHMP4A-204ENST00000530996 RRNAD1Q96FB5 475 aaKnown RBP11.52□□□□□ -0.57
CHMP4A-204ENST00000530996 ZNF486Q96H40 463 aaPredicted RBP11.52□□□□□ -0.57
CHMP4A-204ENST00000530996 GRAMD2BQ96HH9 432 aa11.52□□□□□ -0.57
CHMP4A-204ENST00000530996 TP53RKQ96S44 253 aa11.52□□□□□ -0.57
CHMP4A-204ENST00000530996 COPZ2Q9P299 210 aa11.52□□□□□ -0.57
CHMP4A-204ENST00000530996 C3orf85A0A1B0GTC6 90 aa11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 HPGDSO60760 199 aa11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 CLN5O75503 358 aa11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 RNASE2P10153 161 aaKnown RBP11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 MIFP14174 115 aa11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 C4BPBP20851 252 aa11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 HLA-DMBP28068 263 aa11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 EIF2B2P49770 351 aaKnown RBP11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 RND3P61587 244 aa11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 NCS1P62166 190 aa11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 CCDC71LQ8N9Z2 235 aa11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 CLEC5AQ9NY25 188 aa11.51□□□□□ -0.57
CHMP4A-204ENST00000530996 HERC2O95714 4834 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 A0A087WXM4 84 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 TRAV10A0A0B4J240 114 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 A0A0B4J293 547 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 K7EQG2 157 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 ELK1P19419 428 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 ETV6P41212 452 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 VBP1P61758 197 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 DHRS2Q13268 280 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 TIGITQ495A1 244 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 SCGB2B2Q4G0G5 96 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 Q6ZTC4 211 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 HRH4Q9H3N8 390 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 APLNQ9ULZ1 77 aa11.5□□□□□ -0.57
CHMP4A-204ENST00000530996 IGHV4-4A0A075B6R2 117 aa11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 RPS10-NUDT3A0A1W2PQS6 291 aa11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 CD3DP04234 171 aa11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 RBMY1A1P0DJD3 496 aaKnown RBP11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 RBMY1CP0DJD4 496 aa11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 RBMY1FQ15415 496 aaKnown RBP11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 SP6Q3SY56 376 aa11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 PSMG4Q5JS54 123 aa11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 FNDC4Q9H6D8 234 aaPredicted RBP11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 MRPL36Q9P0J6 103 aaKnown RBP11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 TBC1D24Q9ULP9 559 aa11.49□□□□□ -0.57
CHMP4A-204ENST00000530996 HELTA6NFD8 242 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 INS-IGF2F8WCM5 200 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 TNFAIP8O95379 198 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 P0C879 139 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 CRYBB3P26998 211 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 MZT2AQ6P582 158 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 ARRDC1Q8N5I2 433 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 OR4X1Q8NH49 305 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 ZFAND1Q8TCF1 268 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 KLK11Q9UBX7 282 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 HECTD4Q9Y4D8 3996 aa11.48□□□□□ -0.57
CHMP4A-204ENST00000530996 A0A0G2JRQ6 117 aa11.47□□□□□ -0.57
CHMP4A-204ENST00000530996 GIG44P09565 113 aaPredicted RBP11.47□□□□□ -0.57
CHMP4A-204ENST00000530996 RND2P52198 227 aa11.47□□□□□ -0.57
CHMP4A-204ENST00000530996 MLANAQ16655 118 aa11.47□□□□□ -0.57
CHMP4A-204ENST00000530996 OR13C8Q8NGS7 320 aa11.47□□□□□ -0.57
CHMP4A-204ENST00000530996 FUNDC2Q9BWH2 189 aa11.47□□□□□ -0.57
CHMP4A-204ENST00000530996 TRAV30A0A087WSZ9 112 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 CEBPZOSA8MTT3 80 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 TBPP20226 339 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 OR10J1P30954 320 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 HTR2BP41595 481 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 SNRPD3P62318 126 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 ZNF767PQ75MW2 155 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 LHFPL1Q86WI0 220 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 OR1S2Q8NGQ3 325 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 OR52I2Q8NH67 350 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 DCANP1Q8TF63 244 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 AP3S1Q92572 193 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 HEYLQ9NQ87 328 aaPredicted RBP11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 EXTL2Q9UBQ6 330 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 CELA1Q9UNI1 258 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 C14orf166Q9Y224 244 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 X6R8D5 127 aa11.46□□□□□ -0.57
CHMP4A-204ENST00000530996 ELOA3CA0A087WX78 387 aaPredicted RBP11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 TEX13DA0A0J9YY54 714 aaPredicted RBP11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 ZNF705EA8MWA4 302 aaPredicted RBP11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 IGKV1-17P01599 117 aa11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 UCP1P25874 307 aa11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 RPL5P46777 297 aaKnown RBP11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 RORCP51449 518 aa11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 SPCS3P61009 180 aa11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 PVRIGQ6DKI7 326 aa11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 OR4D10Q8NGI6 311 aa11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 MARCH1Q8TCQ1 289 aa11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 Q8WTZ3 238 aa11.45□□□□□ -0.58
CHMP4A-204ENST00000530996 DEFB131BA0A096LNP1 70 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms