RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 OR52E5Q8NH55 327 aa9.92□□□□□ -0.82
VPS28-211ENST00000530790 RNF2Q99496 336 aa9.92□□□□□ -0.82
VPS28-211ENST00000530790 KCNIP3Q9Y2W7 256 aa9.92□□□□□ -0.82
VPS28-211ENST00000530790 CEBPZOSA8MTT3 80 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 HTR2BP41595 481 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 APOC4P55056 127 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 AP3S2P59780 193 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 BSXQ3C1V8 233 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 ODF3L2Q3SX64 289 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 IL22RA2Q969J5 263 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 TMEM230Q96A57 120 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 GPR146Q96CH1 333 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 GALNT14Q96FL9 552 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 SOSTQ9BQB4 213 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 HEYLQ9NQ87 328 aaPredicted RBP9.91□□□□□ -0.82
VPS28-211ENST00000530790 CACFD1Q9UGQ2 172 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 PUS1Q9Y606 427 aaKnown RBP eCLIP9.91□□□□□ -0.82
VPS28-211ENST00000530790 TMEM56-RWDD3S4R434 201 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 RYR3Q15413 4870 aa9.91□□□□□ -0.82
VPS28-211ENST00000530790 IGHV3OR16-13A0A075B7E8 117 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 IGHV3-74A0A0B4J1X5 117 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 RPS10-NUDT3A0A1W2PQS6 291 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 ANXA3P12429 323 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 S100A5P33763 92 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 PYDC2Q56P42 97 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 TOMM20LQ6UXN7 152 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 SLC24A4Q8NFF2 622 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 IL17DQ8TAD2 202 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 TRIM63Q969Q1 353 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 FNDC4Q9H6D8 234 aaPredicted RBP9.9□□□□□ -0.82
VPS28-211ENST00000530790 ZFAND3Q9H8U3 227 aa9.9□□□□□ -0.82
VPS28-211ENST00000530790 IGKV3-7A0A075B6H7 116 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 CLN5O75503 358 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 NXPH3O95157 252 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 TMEM50AO95807 157 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 CD5P06127 495 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 SULT1A3P0DMM9 295 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 SULT1A4P0DMN0 295 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 AKR1C4P17516 323 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 TFPI2P48307 235 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 SRPXP78539 464 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 KLF9Q13886 244 aaPredicted RBP9.89□□□□□ -0.83
VPS28-211ENST00000530790 TMEM187Q14656 261 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 TCF24Q7RTU0 167 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 TOMM5Q8N4H5 51 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 OR4X1Q8NH49 305 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 TMEM231Q9H6L2 316 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 PRR13Q9NZ81 148 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 V9GYH0 126 aa9.89□□□□□ -0.83
VPS28-211ENST00000530790 A0A0B4J2A0 478 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 PIGBOS1A0A0B4J2F0 54 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 A0A1B0GU03 582 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 CMC4P56277 68 aaPredicted RBP9.88□□□□□ -0.83
VPS28-211ENST00000530790 PAFAH1B2P68402 229 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 C2orf83Q53S99 150 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 TMED4Q7Z7H5 227 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 LGI3Q8N145 548 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 RNASEH2CQ8TDP1 164 aaKnown RBP9.88□□□□□ -0.83
VPS28-211ENST00000530790 ST8SIA2Q92186 375 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 OVOL2Q9BRP0 275 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 VSIRQ9H7M9 311 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 MRPL36Q9P0J6 103 aaKnown RBP9.88□□□□□ -0.83
VPS28-211ENST00000530790 SHPKQ9UHJ6 478 aa9.88□□□□□ -0.83
VPS28-211ENST00000530790 TRAV30A0A087WSZ9 112 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 IGHV3-66A0A0C4DH42 116 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 KIR2DL5BA0A0G2JN68 375 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 KIR2DL5BA0A0G2JPC4 375 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 UBE2CO00762 179 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 SLC25A4P12235 298 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 RPL35AP18077 110 aaKnown RBP9.87□□□□□ -0.83
VPS28-211ENST00000530790 NPPCP23582 126 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 NPY1RP25929 384 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 CCR6P51684 374 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 RND2P52198 227 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 SUPT4H1P63272 117 aaKnown RBP9.87□□□□□ -0.83
VPS28-211ENST00000530790 TNFRSF9Q07011 255 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 SMCO1Q147U7 214 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 ZNF79Q15937 498 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 DEFB135Q30KP9 77 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 NMSQ5H8A3 153 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 FAM90A2PQ658T7 463 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 ETFRF1Q6IPR1 90 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 Q6ZWC4 215 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 NOXA1Q86UR1 476 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 KIR2DL5AQ8N109 375 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 GBGT1Q8N5D6 347 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 STPG3Q8N7X2 389 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 KIR2DL5BQ8NHK3 375 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 DEDD2Q8WXF8 326 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 NARS2Q96I59 477 aaKnown RBP9.87□□□□□ -0.83
VPS28-211ENST00000530790 METTL26Q96S19 204 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 RBM38Q9H0Z9 239 aaKnown RBP9.87□□□□□ -0.83
VPS28-211ENST00000530790 TP53TG1Q9Y2A0 90 aa9.87□□□□□ -0.83
VPS28-211ENST00000530790 LCE6AA0A183 80 aa9.86□□□□□ -0.83
VPS28-211ENST00000530790 A0A1W2PS18 150 aa9.86□□□□□ -0.83
VPS28-211ENST00000530790 ZNF701M0R085 212 aaPredicted RBP9.86□□□□□ -0.83
VPS28-211ENST00000530790 DNASE2O00115 360 aaPredicted RBP9.86□□□□□ -0.83
VPS28-211ENST00000530790 APOHP02749 345 aaPredicted RBP9.86□□□□□ -0.83
VPS28-211ENST00000530790 RPL11P62913 178 aaKnown RBP9.86□□□□□ -0.83
VPS28-211ENST00000530790 MLANAQ16655 118 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms