RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 WDFY3Q8IZQ1 3526 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 CADP27708 2225 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 DYSFO75923 2080 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 A0A0G2JNJ9 132 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 VSTM5A8MXK1 200 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 F2Z2F3 143 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 K7EM74 188 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 BMPR1BO00238 502 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 NDUFB3O43676 98 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 THBDP07204 575 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 CHRNB4P30926 498 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 BPIFB3P59826 476 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 PLP1P60201 277 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 CCL8P80075 99 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 SSBP2P81877 361 aaPredicted RBP6.75□□□□□ -1.33
CSTF3-208ENST00000528865 TMEM155Q4W5P6 130 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 IBA57Q5T440 356 aaKnown RBP6.75□□□□□ -1.33
CSTF3-208ENST00000528865 MORN5Q5VZ52 161 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 C10orf113Q5VZT2 155 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 ETFRF1Q6IPR1 90 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 TGIF2LXQ8IUE1 241 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 TEX45Q8NA69 505 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 STXBP6Q8NFX7 210 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 NPIPB3Q92617 1050 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 RND1Q92730 232 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 FXYD5Q96DB9 178 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 SMIM12Q96EX1 92 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 TRGV9Q99603 122 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 C7orf69Q9H7B7 122 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF355PQ9NSJ1 428 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 MRPL27Q9P0M9 148 aaKnown RBP6.75□□□□□ -1.33
CSTF3-208ENST00000528865 Q9UFV3 132 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 AMMECR1Q9Y4X0 333 aaPredicted RBP6.75□□□□□ -1.33
CSTF3-208ENST00000528865 KLF12Q9Y4X4 402 aa6.75□□□□□ -1.33
CSTF3-208ENST00000528865 TNCP24821 2201 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 A0A1W2PS18 150 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 PEX7O00628 323 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 TCAPO15273 167 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 COX7A2P2O60397 106 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 OR2J3O76001 311 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 TDGF1P3P51864 188 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 PRRX1P54821 245 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 UBE2L3P68036 154 aaKnown RBP6.74□□□□□ -1.33
CSTF3-208ENST00000528865 KLF5Q13887 457 aaPredicted RBP6.74□□□□□ -1.33
CSTF3-208ENST00000528865 DIAPH2-AS1Q14236 149 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 USF2Q15853 346 aaPredicted RBP6.74□□□□□ -1.33
CSTF3-208ENST00000528865 TMEM183BQ1AE95 376 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 VMA21Q3ZAQ7 101 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 LRRC10Q5BKY1 277 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 LYPD2Q6UXB3 125 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 C11orf42Q8N5U0 333 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 SIGLECL1Q8N7X8 197 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 NUDT10Q8NFP7 164 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 TMEM190Q8WZ59 177 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 TNFRSF14Q92956 283 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 NUDT11Q96G61 164 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 CBLN4Q9NTU7 201 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 MRPL36Q9P0J6 103 aaKnown RBP6.74□□□□□ -1.33
CSTF3-208ENST00000528865 NAT8BQ9UHF3 227 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 FBXL7Q9UJT9 491 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 EPDR1Q9UM22 224 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF835Q9Y2P0 537 aa6.74□□□□□ -1.33
CSTF3-208ENST00000528865 RAI1Q7Z5J4 1906 aaPredicted RBP6.74□□□□□ -1.33
CSTF3-208ENST00000528865 A0A1W2PPI3 338 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 IGLC7A0M8Q6 106 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 PRRG2O14669 202 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 APCSP02743 223 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 LOXP28300 417 aaPredicted RBP6.73□□□□□ -1.33
CSTF3-208ENST00000528865 CDKN1AP38936 164 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 CTRLP40313 264 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 BSPH1Q075Z2 132 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 FXYD3Q14802 87 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 TBR1Q16650 682 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 TDRG1Q3Y452 100 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 TOMM20LQ6UXN7 152 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 C19orf35Q6ZS72 473 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 NIT1Q86X76 327 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 WFDC8Q8IUA0 241 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 OR10X1Q8NGY0 326 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 FAM168AQ92567 244 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 RNASE6Q93091 150 aaKnown RBP6.73□□□□□ -1.33
CSTF3-208ENST00000528865 KCNS1Q96KK3 526 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 MLST8Q9BVC4 326 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 SAMD10Q9BYL1 202 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 NRN1Q9NPD7 142 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF331Q9NQX6 463 aaPredicted RBP6.73□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF586Q9NXT0 402 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 CTSZQ9UBR2 303 aa6.73□□□□□ -1.33
CSTF3-208ENST00000528865 NCOR1O75376 2440 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 TRBV6-1A0A0K0K1D8 114 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 C22orf46C9J442 243 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF253O75346 499 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF324O75467 553 aaPredicted RBP6.72□□□□□ -1.33
CSTF3-208ENST00000528865 IGHV1-8P0DP01 117 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 PYYP10082 97 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 MGST1P10620 155 aaKnown RBP6.72□□□□□ -1.33
CSTF3-208ENST00000528865 CD33P20138 364 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 SRIP30626 198 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 REG1BP48304 166 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 KIAA1644Q3SXP7 199 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms