RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 LHFPL1Q86WI0 220 aa16.41■□□□□ 0.22
TRAPPC4-208ENST00000527680 STHQ8IWL8 128 aa16.41■□□□□ 0.22
TRAPPC4-208ENST00000527680 A0A1B0GU03 582 aa16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 INS-IGF2F8WCM5 200 aa16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 DEFB4AO15263 64 aa16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 SCGB2A1O75556 95 aa16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 RNASE2P10153 161 aaKnown RBP16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 MLANAQ16655 118 aa16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 RPP25LQ8N5L8 163 aaKnown RBP16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 TERB2Q8NHR7 220 aa16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 METTL26Q96S19 204 aa16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 ZFAND3Q9H8U3 227 aa16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 MTFP1Q9UDX5 166 aa16.4■□□□□ 0.22
TRAPPC4-208ENST00000527680 ZNF182P17025 639 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC4-208ENST00000527680 TBPP20226 339 aa16.39■□□□□ 0.21
TRAPPC4-208ENST00000527680 STXBP6Q8NFX7 210 aa16.39■□□□□ 0.21
TRAPPC4-208ENST00000527680 NARS2Q96I59 477 aaKnown RBP16.39■□□□□ 0.21
TRAPPC4-208ENST00000527680 TRAV2A0A0B4J234 112 aa16.38■□□□□ 0.21
TRAPPC4-208ENST00000527680 CLN5O75503 358 aa16.38■□□□□ 0.21
TRAPPC4-208ENST00000527680 RAB3DO95716 219 aa16.38■□□□□ 0.21
TRAPPC4-208ENST00000527680 P0C879 139 aa16.38■□□□□ 0.21
TRAPPC4-208ENST00000527680 LGALS9CQ6DKI2 356 aa16.38■□□□□ 0.21
TRAPPC4-208ENST00000527680 FAM24BQ8N5W8 94 aa16.38■□□□□ 0.21
TRAPPC4-208ENST00000527680 OR4D10Q8NGI6 311 aa16.38■□□□□ 0.21
TRAPPC4-208ENST00000527680 C15orf40Q8WUR7 153 aa16.38■□□□□ 0.21
TRAPPC4-208ENST00000527680 DEDDO75618 318 aa16.37■□□□□ 0.21
TRAPPC4-208ENST00000527680 TAS2R19P59542 299 aa16.37■□□□□ 0.21
TRAPPC4-208ENST00000527680 TMEM229BQ8NBD8 167 aa16.37■□□□□ 0.21
TRAPPC4-208ENST00000527680 OR13C8Q8NGS7 320 aa16.37■□□□□ 0.21
TRAPPC4-208ENST00000527680 OR4X1Q8NH49 305 aa16.37■□□□□ 0.21
TRAPPC4-208ENST00000527680 MARCH1Q8TCQ1 289 aa16.37■□□□□ 0.21
TRAPPC4-208ENST00000527680 ABHD1Q96SE0 405 aa16.37■□□□□ 0.21
TRAPPC4-208ENST00000527680 C11orf68Q9H3H3 251 aaKnown RBP16.37■□□□□ 0.21
TRAPPC4-208ENST00000527680 FNDC4Q9H6D8 234 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC4-208ENST00000527680 MRPL36Q9P0J6 103 aaKnown RBP16.37■□□□□ 0.21
TRAPPC4-208ENST00000527680 PVRIGQ6DKI7 326 aa16.36■□□□□ 0.21
TRAPPC4-208ENST00000527680 NAA50Q9GZZ1 169 aaKnown RBP16.36■□□□□ 0.21
TRAPPC4-208ENST00000527680 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC4-208ENST00000527680 AGRNO00468 2067 aa16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 TRAV30A0A087WSZ9 112 aa16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 TEX13DA0A0J9YY54 714 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 B3GALNT1O75752 331 aa16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 UCP1P25874 307 aa16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 RPL5P46777 297 aaKnown RBP16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 P2RY1P47900 373 aa16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 SPCS3P61009 180 aa16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 TIGITQ495A1 244 aa16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 STEAP1BQ6NZ63 245 aa16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 C2CD4CQ8TF44 421 aa16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 GRAMD2BQ96HH9 432 aa16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 HEYLQ9NQ87 328 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 C14orf166Q9Y224 244 aaKnown RBP16.35■□□□□ 0.21
TRAPPC4-208ENST00000527680 A0A0G2JRQ6 117 aa16.34■□□□□ 0.21
TRAPPC4-208ENST00000527680 RPS10-NUDT3A0A1W2PQS6 291 aa16.34■□□□□ 0.21
TRAPPC4-208ENST00000527680 RGS5O15539 181 aa16.34■□□□□ 0.21
TRAPPC4-208ENST00000527680 CRYBB3P26998 211 aa16.34■□□□□ 0.21
TRAPPC4-208ENST00000527680 Q6ZRM9 215 aa16.34■□□□□ 0.21
TRAPPC4-208ENST00000527680 K7EQG2 157 aa16.33■□□□□ 0.2
TRAPPC4-208ENST00000527680 CD74P04233 296 aa16.33■□□□□ 0.2
TRAPPC4-208ENST00000527680 OR5AC1P0C628 307 aa16.33■□□□□ 0.2
TRAPPC4-208ENST00000527680 ZNF688P0C7X2 276 aa16.33■□□□□ 0.2
TRAPPC4-208ENST00000527680 HTR2BP41595 481 aa16.33■□□□□ 0.2
TRAPPC4-208ENST00000527680 EIF2B2P49770 351 aaKnown RBP16.33■□□□□ 0.2
TRAPPC4-208ENST00000527680 CTF1Q16619 201 aa16.33■□□□□ 0.2
TRAPPC4-208ENST00000527680 GPR107Q5VW38 600 aa16.33■□□□□ 0.2
TRAPPC4-208ENST00000527680 FAM219AQ8IW50 185 aa16.33■□□□□ 0.2
TRAPPC4-208ENST00000527680 Q8WTZ3 238 aa16.33■□□□□ 0.2
TRAPPC4-208ENST00000527680 CDS2O95674 445 aa16.32■□□□□ 0.2
TRAPPC4-208ENST00000527680 CENPSQ8N2Z9 138 aa16.32■□□□□ 0.2
TRAPPC4-208ENST00000527680 TMEM222Q9H0R3 208 aa16.32■□□□□ 0.2
TRAPPC4-208ENST00000527680 KNCNA6PVL3 124 aa16.31■□□□□ 0.2
TRAPPC4-208ENST00000527680 CEBPZOSA8MTT3 80 aa16.31■□□□□ 0.2
TRAPPC4-208ENST00000527680 GABARAPH6UMI1 98 aa16.31■□□□□ 0.2
TRAPPC4-208ENST00000527680 GABARAPO95166 117 aa16.31■□□□□ 0.2
TRAPPC4-208ENST00000527680 IGKV1-17P01599 117 aa16.31■□□□□ 0.2
TRAPPC4-208ENST00000527680 MEF2DQ14814 521 aa16.31■□□□□ 0.2
TRAPPC4-208ENST00000527680 FAAP20Q6NZ36 180 aa16.31■□□□□ 0.2
TRAPPC4-208ENST00000527680 OR52E5Q8NH55 327 aa16.31■□□□□ 0.2
TRAPPC4-208ENST00000527680 GLYATL2Q8WU03 294 aa16.31■□□□□ 0.2
TRAPPC4-208ENST00000527680 IGLL5B9A064 214 aa16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 DISC1C4P0D8 188 aa16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 DHODHQ02127 395 aa16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 DHRS2Q13268 280 aa16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 BSXQ3C1V8 233 aa16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 TMEM41BQ5BJD5 291 aa16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 ACTL10Q5JWF8 245 aa16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 MORN3Q6PF18 240 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 TRPT1Q86TN4 253 aaKnown RBP16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 SELENOHQ8IZQ5 122 aaKnown RBP16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 RBPMSQ93062 196 aaKnown RBP16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 RTBDNQ9BSG5 229 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 NAA60Q9H7X0 242 aa16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 CACNG5Q9UF02 275 aa16.3■□□□□ 0.2
TRAPPC4-208ENST00000527680 HELTA6NFD8 242 aa16.29■□□□□ 0.2
TRAPPC4-208ENST00000527680 SPP1P10451 314 aa16.29■□□□□ 0.2
TRAPPC4-208ENST00000527680 RND2P52198 227 aa16.29■□□□□ 0.2
TRAPPC4-208ENST00000527680 AP2S1P53680 142 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC4-208ENST00000527680 SSBP1Q04837 148 aaKnown RBP16.29■□□□□ 0.2
TRAPPC4-208ENST00000527680 TMEM268Q5VZI3 342 aa16.29■□□□□ 0.2
TRAPPC4-208ENST00000527680 OR1S2Q8NGQ3 325 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms