RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TMEM177Q53S58 311 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 IBA57Q5T440 356 aaKnown RBP9.44□□□□□ -0.9
LINC01001-201ENST00000526704 Q6ZS92 163 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 OR5AN1Q8NGI8 311 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 C20orf144Q9BQM9 153 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 COMMD5Q9GZQ3 224 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 FBXL7Q9UJT9 491 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 SMIM27A0A1W2PRY6 76 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 CGB1A6NKQ9 187 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 MGST1P10620 155 aaKnown RBP9.44□□□□□ -0.9
LINC01001-201ENST00000526704 NHLRC2Q8NBF2 726 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 CACNG8Q8WXS5 425 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 SAMD10Q9BYL1 202 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 MGAQ8IWI9 3026 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 INS-IGF2F8WCM5 200 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 AMY1AP04745 511 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 MEF2CQ06413 473 aaPredicted RBP9.43□□□□□ -0.9
LINC01001-201ENST00000526704 KIAA1644Q3SXP7 199 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 RCHY1Q96PM5 261 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 FNDC4Q9H6D8 234 aaPredicted RBP9.43□□□□□ -0.9
LINC01001-201ENST00000526704 CEP250Q9BV73 2442 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 A6NNC1 897 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 K7EM74 188 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 PYYP10082 97 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 USF1P22415 310 aaPredicted RBP9.43□□□□□ -0.9
LINC01001-201ENST00000526704 ERHP84090 104 aaKnown RBP9.43□□□□□ -0.9
LINC01001-201ENST00000526704 WT1-ASQ06250 92 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 DIAPH2-AS1Q14236 149 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 C10orf55Q5SWW7 151 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 ASPHD1Q5U4P2 390 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 MRPL54Q6P161 138 aaKnown RBP9.43□□□□□ -0.9
LINC01001-201ENST00000526704 ZNF705AQ6ZN79 300 aaPredicted RBP9.43□□□□□ -0.9
LINC01001-201ENST00000526704 ZCCHC24Q8N2G6 241 aaKnown RBP9.43□□□□□ -0.9
LINC01001-201ENST00000526704 TMEM167AQ8TBQ9 72 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 VN1R17PQ8TDU5 208 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 RNF2Q99496 336 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 DNAJC4Q9NNZ3 241 aa9.43□□□□□ -0.9
LINC01001-201ENST00000526704 ZGRF1Q86YA3 2104 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 BMPR1BO00238 502 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 CA1P00915 261 aaPredicted RBP9.42□□□□□ -0.9
LINC01001-201ENST00000526704 GPX1P07203 203 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 RPL19P84098 196 aaKnown RBP9.42□□□□□ -0.9
LINC01001-201ENST00000526704 COX19Q49B96 90 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 TMEM200BQ69YZ2 307 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 PATE2Q6UY27 113 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 RBMXL3Q8N7X1 1067 aaKnown RBP9.42□□□□□ -0.9
LINC01001-201ENST00000526704 Q8N976 141 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 FLYWCH2Q96CP2 140 aaKnown RBP9.42□□□□□ -0.9
LINC01001-201ENST00000526704 KCNS1Q96KK3 526 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 LINC00479Q96M42 142 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 CDC42EP3Q9UKI2 254 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 ROS1P08922 2347 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 IGKV1D-37A0A075B6S9 117 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 C17orf100A8MU93 164 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 IGLV2-23P01705 113 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 TNFRSF1AP19438 455 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 BRS3P32247 399 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 TMEM183BQ1AE95 376 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 SIGLECL1Q8N7X8 197 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 FAM168AQ92567 244 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 FAM103A1Q9BTL3 118 aaKnown RBP9.42□□□□□ -0.9
LINC01001-201ENST00000526704 ZNF430Q9H8G1 570 aaPredicted RBP9.42□□□□□ -0.9
LINC01001-201ENST00000526704 ZNF355PQ9NSJ1 428 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 PAM16Q9Y3D7 125 aa9.42□□□□□ -0.9
LINC01001-201ENST00000526704 TBL2Q9Y4P3 447 aaKnown RBP9.42□□□□□ -0.9
LINC01001-201ENST00000526704 A0A1W2PN81 502 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 COX7A2P2O60397 106 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 FSTL3O95633 263 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 SRIP30626 198 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 ADIPOQQ15848 244 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 DMRTA1Q5VZB9 504 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 ZNF329Q86UD4 541 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 FAM57AQ8TBR7 257 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 VAMP8Q9BV40 100 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 LPAR2Q9HBW0 351 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 SERTAD4Q9NUC0 356 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 MRPL36Q9P0J6 103 aaKnown RBP9.41□□□□□ -0.9
LINC01001-201ENST00000526704 AKAP13Q12802 2813 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 TTC28Q96AY4 2481 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 TCRBV4S1A1TA0A5B7 111 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 IZUMO1RA6ND01 250 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 IGHV3-48P01763 117 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 C10orf113Q5VZT2 155 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 PDPNQ86YL7 162 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 OR4C13Q8NGP0 309 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 OR4A5Q8NH83 315 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 MIEN1Q9BRT3 115 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 PAXXQ9BUH6 204 aa9.41□□□□□ -0.9
LINC01001-201ENST00000526704 ZNF318Q5VUA4 2279 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 A0A1W2PS18 150 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 TMEM108Q6UXF1 575 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 THAP8Q8NA92 274 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 OR10X1Q8NGY0 326 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 NPIPB3Q92617 1050 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 MBD6Q96DN6 1003 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 SSBP3Q9BWW4 388 aaPredicted RBP9.4□□□□□ -0.9
LINC01001-201ENST00000526704 NRN1Q9NPD7 142 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 ZNF586Q9NXT0 402 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms