RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 RCHY1Q96PM5 261 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 HIPK2Q9H2X6 1198 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 S4R3C0 116 aa9.48□□□□□ -0.89
SMCO4-202ENST00000525141 I3L2K1 104 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 CORTO00230 105 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 IL5P05113 134 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 DEFB114Q30KQ6 69 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 LINC00322Q6ZN03 302 aaPredicted RBP9.47□□□□□ -0.89
SMCO4-202ENST00000525141 NRARPQ7Z6K4 114 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 NOXA1Q86UR1 476 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 GPHB5Q86YW7 130 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 ZNF431Q8TF32 576 aaPredicted RBP9.47□□□□□ -0.89
SMCO4-202ENST00000525141 TXN2Q99757 166 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 TM2D3Q9BRN9 247 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 GAR1Q9NY12 217 aaKnown RBP9.47□□□□□ -0.89
SMCO4-202ENST00000525141 C21orf62Q9NYP8 219 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 U3KQ87 197 aa9.47□□□□□ -0.89
SMCO4-202ENST00000525141 DYNC2H1Q8NCM8 4307 aaKnown RBP9.47□□□□□ -0.89
SMCO4-202ENST00000525141 MED6O75586 246 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 ADAP1O75689 374 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 MT-CO2P00403 227 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 ARL3P36405 182 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 C2orf83Q53S99 150 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 SPSB3Q6PJ21 355 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 OR52B4Q8NGK2 314 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 DTD1Q8TEA8 209 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 MISP3Q96FF7 219 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 BSCL2Q96G97 398 aaPredicted RBP9.46□□□□□ -0.9
SMCO4-202ENST00000525141 MARVELD1Q9BSK0 173 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 RBKSQ9H477 322 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 TENM2Q9NT68 2774 aa9.46□□□□□ -0.9
SMCO4-202ENST00000525141 LGALS9O00182 355 aa9.45□□□□□ -0.9
SMCO4-202ENST00000525141 MFAP4P55083 255 aa9.45□□□□□ -0.9
SMCO4-202ENST00000525141 ID3Q02535 119 aa9.45□□□□□ -0.9
SMCO4-202ENST00000525141 HAGHQ16775 308 aa9.45□□□□□ -0.9
SMCO4-202ENST00000525141 CD300EQ496F6 205 aaPredicted RBP9.45□□□□□ -0.9
SMCO4-202ENST00000525141 FAM106AQ4KMX7 169 aa9.45□□□□□ -0.9
SMCO4-202ENST00000525141 PLET1Q6UQ28 207 aa9.45□□□□□ -0.9
SMCO4-202ENST00000525141 C12orf45Q8N5I9 185 aaPredicted RBP9.45□□□□□ -0.9
SMCO4-202ENST00000525141 SLC24A4Q8NFF2 622 aa9.45□□□□□ -0.9
SMCO4-202ENST00000525141 RNASEH2CQ8TDP1 164 aaKnown RBP9.45□□□□□ -0.9
SMCO4-202ENST00000525141 SEC22CQ9BRL7 303 aa9.45□□□□□ -0.9
SMCO4-202ENST00000525141 SELENOKQ9Y6D0 94 aa9.45□□□□□ -0.9
SMCO4-202ENST00000525141 IGHV3-21A0A0B4J1V1 117 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 C2orf70A6NJV1 201 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 MPTX1A8MV57 137 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 F8W735 103 aaPredicted RBP9.44□□□□□ -0.9
SMCO4-202ENST00000525141 INMT-MINDY4F8WBC2 141 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 C3orf84H3BNL1 204 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 TGOLN2O43493 480 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 SYNGR2O43760 224 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 PRAF2O60831 178 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 NXPH3O95157 252 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 CTSGP08311 255 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 FOLR2P14207 255 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 GPR183P32249 361 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 PINX1Q96BK5 328 aaKnown RBP9.44□□□□□ -0.9
SMCO4-202ENST00000525141 CIB3Q96Q77 187 aaPredicted RBP9.44□□□□□ -0.9
SMCO4-202ENST00000525141 GPN1Q9HCN4 374 aaPredicted RBP9.44□□□□□ -0.9
SMCO4-202ENST00000525141 PALMDQ9NP74 551 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 PEMTQ9UBM1 199 aa9.44□□□□□ -0.9
SMCO4-202ENST00000525141 RYR2Q92736 4967 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 OR2T8A6NH00 312 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 SNRPGP15A8MWD9 76 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 IFNA10P01566 189 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 CD7P09564 240 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 CBLN1P23435 193 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 NPY1RP25929 384 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 NPBWR1P48145 328 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 IAH1Q2TAA2 248 aaPredicted RBP9.43□□□□□ -0.9
SMCO4-202ENST00000525141 Q56UQ5 140 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 OR4D5Q8NGN0 318 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 TMEM170AQ8WVE7 144 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 OR10C1Q96KK4 312 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 EDA2RQ9HAV5 297 aa9.43□□□□□ -0.9
SMCO4-202ENST00000525141 CSMD3Q7Z407 3707 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 RPS10-NUDT3A0A1W2PQS6 291 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 NUPL2O15504 423 aaKnown RBP9.42□□□□□ -0.9
SMCO4-202ENST00000525141 ADMP35318 185 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 OPRK1P41145 380 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 NKX2-1P43699 371 aaPredicted RBP9.42□□□□□ -0.9
SMCO4-202ENST00000525141 RPP30P78346 268 aaKnown RBP9.42□□□□□ -0.9
SMCO4-202ENST00000525141 ETFRF1Q6IPR1 90 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 LCN12Q6JVE5 192 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 UNQ9165/PRO28630Q6UXU0 137 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 UBAC2Q8NBM4 344 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 UXS1Q8NBZ7 420 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 OR2K2Q8NGT1 345 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 OR4X1Q8NH49 305 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 MUC7Q8TAX7 377 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 CACNG8Q8WXS5 425 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 ZNF414Q96IQ9 312 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 CITED4Q96RK1 184 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 CHRDL1Q9BU40 450 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 ZNF436Q9C0F3 470 aaPredicted RBP9.42□□□□□ -0.9
SMCO4-202ENST00000525141 FNDC4Q9H6D8 234 aaPredicted RBP9.42□□□□□ -0.9
SMCO4-202ENST00000525141 ZMAT4Q9H898 229 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 ZC4H2Q9NQZ6 224 aa9.42□□□□□ -0.9
SMCO4-202ENST00000525141 SACSQ9NZJ4 4579 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms