RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	TPI1	P60174	286 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	TMEM267	Q0VDI3	215 aa	Predicted RBP	3	□□□□□ -1.93
PCM1-223	ENST00000524356	TCTEX1D4	Q5JR98	221 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	AKR1C8P	Q5T2L2	129 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	NXNL2	Q5VZ03	156 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	NANOGP8	Q6NSW7	305 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	RPL13AP3	Q6NVV1	102 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	DCUN1D2	Q6PH85	259 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	TMEM205	Q6UW68	189 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	TOMM20L	Q6UXN7	152 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	TMPPE	Q6ZT21	453 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	SLC16A13	Q7RTY0	426 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	MDP1	Q86V88	176 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	C20orf196	Q8IYI0	205 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	KLHL30-AS1	Q8NEE0	82 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	OR11H6	Q8NGC7	330 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	OR51H1	Q8NH63	302 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	ZNRF2	Q8NHG8	242 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	TWIST2	Q8WVJ9	160 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	EXOSC8	Q96B26	276 aa	Known RBP	3	□□□□□ -1.93
PCM1-223	ENST00000524356	FOPNL	Q96NB1	174 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	IP6K3	Q96PC2	410 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	GPER1	Q99527	375 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	TIMM17A	Q99595	171 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	HSD17B10	Q99714	261 aa	Known RBP	3	□□□□□ -1.93
PCM1-223	ENST00000524356	OPRPN	Q99935	248 aa	Predicted RBP	3	□□□□□ -1.93
PCM1-223	ENST00000524356	ANAPC13	Q9BS18	74 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	SNRNP25	Q9BV90	132 aa	Known RBP	3	□□□□□ -1.93
PCM1-223	ENST00000524356	ZNF436	Q9C0F3	470 aa	Predicted RBP	3	□□□□□ -1.93
PCM1-223	ENST00000524356	MAP1LC3B	Q9GZQ8	125 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	NANOG	Q9H9S0	305 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	LRTM1	Q9HBL6	345 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	WFDC1	Q9HC57	220 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	RSL24D1	Q9UHA3	163 aa	Known RBP	3	□□□□□ -1.93
PCM1-223	ENST00000524356	LINC00527	Q9UJ94	153 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	RPL26L1	Q9UNX3	145 aa	Known RBP	3	□□□□□ -1.93
PCM1-223	ENST00000524356	POMP	Q9Y244	141 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	WASHC3	Q9Y3C0	194 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	ASB4	Q9Y574	426 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	TET2	Q6N021	2002 aa	Predicted RBP	3	□□□□□ -1.93
PCM1-223	ENST00000524356	PRR14L	Q5THK1	2151 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	C9orf170	A2RU37	121 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	TMEM250	H0YL14	139 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	SULT1C4	O75897	302 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	SUPT7L	O94864	414 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	IFNG	P01579	166 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	C1QB	P02746	253 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	HSPB1	P04792	205 aa	Known RBP	2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	S100A8	P05109	93 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	FGF6	P10767	208 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	COX6A1	P12074	109 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	ERP29	P30040	261 aa	Known RBP	2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	PEBP1	P30086	187 aa	Known RBP	2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	CDK5	Q00535	292 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	DEFA6	Q01524	100 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	SURF2	Q15527	256 aa	Predicted RBP	2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	SSX1	Q16384	188 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	C16orf47	Q6ZP98	133 aa	Predicted RBP	2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	GOLT1A	Q6ZVE7	132 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	C20orf203	Q8NBC4	194 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	OR5H6	Q8NGV6	325 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	CD200R1	Q8TD46	325 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	GNPDA2	Q8TDQ7	276 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	ORAOV1	Q8WV07	137 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	PTX4	Q96A99	478 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	IMMP1L	Q96LU5	166 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	TRIB3	Q96RU7	358 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	LYSMD1	Q96S90	227 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	PFDN5	Q99471	154 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	MS4A8	Q9BY19	250 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	SH3BGRL3	Q9H299	93 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	UQCC1	Q9NVA1	299 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	PRND	Q9UKY0	176 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	SNRNP200	O75643	2136 aa	Known RBP	2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	MEGF8	Q7Z7M0	2845 aa		2.99	□□□□□ -1.93
PCM1-223	ENST00000524356	MED12	Q93074	2177 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	KIAA1549	Q9HCM3	1950 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	IGHV1-45	A0A0A0MS14	117 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	TRAV8-1	A0A0A6YYK1	113 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356		A0A1W2PRE2	83 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356		A8MU10	97 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	FAM25A	B3EWG3	89 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	FAM25C	B3EWG5	89 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	FAM25G	B3EWG6	89 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	SRRM5	B3KS81	715 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356		F5H5P2	479 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	INMT-MINDY4	F8WBC2	141 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	SLC17A3	O00476	420 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	COX7A2P2	O60397	106 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	SS18L1	O75177	396 aa	Predicted RBP	2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	SRSF10	O75494	262 aa	Known RBP	2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	IFNA10	P01566	189 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	IGHM	P01871	453 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	HLA-DQB2	P05538	268 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	GIG44	P09565	113 aa	Predicted RBP	2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	SCGB1C2	P0DMR2	95 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	COX4I1	P13073	169 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	CCL1	P22362	96 aa		2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	GATA2	P23769	480 aa	Predicted RBP	2.98	□□□□□ -1.93
PCM1-223	ENST00000524356	RBMX	P38159	391 aa	Known RBP	2.98	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms