RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 CLN5O75503 358 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 DEDDO75618 318 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 GABARAPO95166 117 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 ZNF182P17025 639 aaPredicted RBP13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 TBPP20226 339 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 UCP1P25874 307 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 HOXA1P49639 335 aaPredicted RBP13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 SUB1P53999 127 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 RPL11P62913 178 aaKnown RBP13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 BSXQ3C1V8 233 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 C11orf45Q8TAV5 145 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 MARCH1Q8TCQ1 289 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 PDCD10Q9BUL8 212 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 COPZ2Q9P299 210 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 CORTO00230 105 aa13.71□□□□□ -0.21
PTP4A3-206ENST00000524028 ATG12O94817 140 aa13.71□□□□□ -0.21
PTP4A3-206ENST00000524028 NPPCP23582 126 aa13.71□□□□□ -0.21
PTP4A3-206ENST00000524028 TMEM229BQ8NBD8 167 aa13.71□□□□□ -0.21
PTP4A3-206ENST00000524028 OR4X1Q8NH49 305 aa13.71□□□□□ -0.21
PTP4A3-206ENST00000524028 ZFAND1Q8TCF1 268 aa13.71□□□□□ -0.21
PTP4A3-206ENST00000524028 AP3S1Q92572 193 aa13.71□□□□□ -0.21
PTP4A3-206ENST00000524028 FBXL17Q9UF56 701 aa13.71□□□□□ -0.21
PTP4A3-206ENST00000524028 RABAC1Q9UI14 185 aa13.71□□□□□ -0.21
PTP4A3-206ENST00000524028 RAB3DO95716 219 aa13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 IGKV1-17P01599 117 aa13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 GIG44P09565 113 aaPredicted RBP13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 SMIM18P0DKX4 95 aa13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 CRYBB3P26998 211 aa13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 OPRK1P41145 380 aa13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 RPL5P46777 297 aaKnown RBP13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 TMEM187Q14656 261 aa13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 SCGB2B2Q4G0G5 96 aa13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 LGALS9CQ6DKI2 356 aa13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 CCDC71LQ8N9Z2 235 aa13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 RRNAD1Q96FB5 475 aaKnown RBP13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 MIXL1Q9H2W2 232 aa13.7□□□□□ -0.22
PTP4A3-206ENST00000524028 K7EQG2 157 aa13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 TAS2R19P59542 299 aa13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 RBMS2Q15434 407 aaKnown RBP13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 TIGITQ495A1 244 aa13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 AARDQ4LEZ3 155 aa13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 FAAP20Q6NZ36 180 aa13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 STEAP1BQ6NZ63 245 aa13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 LHFPL5Q8TAF8 219 aa13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 RTBDNQ9BSG5 229 aaPredicted RBP13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 TMEM231Q9H6L2 316 aa13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 ENY2Q9NPA8 101 aa13.69□□□□□ -0.22
PTP4A3-206ENST00000524028 CDS2O95674 445 aa13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 OR5AC1P0C628 307 aa13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 P2RY1P47900 373 aa13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 GPR107Q5VW38 600 aa13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 STXBP6Q8NFX7 210 aa13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 GLYATL2Q8WU03 294 aa13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 TMEM230Q96A57 120 aa13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 METTL26Q96S19 204 aa13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 MFFQ9GZY8 342 aa13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 TMEM222Q9H0R3 208 aa13.68□□□□□ -0.22
PTP4A3-206ENST00000524028 A0A1W2PS18 150 aa13.67□□□□□ -0.22
PTP4A3-206ENST00000524028 B3GALNT1O75752 331 aa13.67□□□□□ -0.22
PTP4A3-206ENST00000524028 SPCS3P61009 180 aa13.67□□□□□ -0.22
PTP4A3-206ENST00000524028 STHQ8IWL8 128 aa13.67□□□□□ -0.22
PTP4A3-206ENST00000524028 Q8NAQ8 132 aa13.67□□□□□ -0.22
PTP4A3-206ENST00000524028 RNASE11Q8TAA1 199 aaKnown RBP13.67□□□□□ -0.22
PTP4A3-206ENST00000524028 DCANP1Q8TF63 244 aa13.67□□□□□ -0.22
PTP4A3-206ENST00000524028 TEX13DA0A0J9YY54 714 aaPredicted RBP13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 KNCNA6PVL3 124 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 GABARAPH6UMI1 98 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 CTDSP2O14595 271 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 IFNA4P05014 189 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 PRR20EP86478 221 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 PRR20CP86479 221 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 PRR20DP86480 221 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 PRR20BP86481 221 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 PRR20AP86496 221 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 FAM219AQ8IW50 185 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 SELENOHQ8IZQ5 122 aaKnown RBP13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 OR52E5Q8NH55 327 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 C15orf40Q8WUR7 153 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 GPR146Q96CH1 333 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 U3KQE9 123 aa13.66□□□□□ -0.22
PTP4A3-206ENST00000524028 ZNF688P0C7X2 276 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 IGLC1P0CG04 106 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 RBMY1A1P0DJD3 496 aaKnown RBP13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 RBMY1CP0DJD4 496 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 C4BPBP20851 252 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 HTR2BP41595 481 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 RBMY1FQ15415 496 aaKnown RBP13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 PRSS54Q6PEW0 395 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 TMEM170AQ8WVE7 144 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 RBPMSQ93062 196 aaKnown RBP13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 GRAMD2BQ96HH9 432 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 NAA60Q9H7X0 242 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 CACNG5Q9UF02 275 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 DNAH10Q8IVF4 4471 aa13.65□□□□□ -0.22
PTP4A3-206ENST00000524028 TRAV30A0A087WSZ9 112 aa13.64□□□□□ -0.23
PTP4A3-206ENST00000524028 RND2P52198 227 aa13.64□□□□□ -0.23
PTP4A3-206ENST00000524028 MEF2DQ14814 521 aa13.64□□□□□ -0.23
PTP4A3-206ENST00000524028 C2orf83Q53S99 150 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms