RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 LHFPL5Q8TAF8 219 aa12.92□□□□□ -0.34
CCNC-213ENST00000523541 TRIM63Q969Q1 353 aa12.92□□□□□ -0.34
CCNC-213ENST00000523541 GPR146Q96CH1 333 aa12.92□□□□□ -0.34
CCNC-213ENST00000523541 GINS3Q9BRX5 216 aa12.92□□□□□ -0.34
CCNC-213ENST00000523541 SHPKQ9UHJ6 478 aa12.92□□□□□ -0.34
CCNC-213ENST00000523541 V9GYH0 126 aa12.92□□□□□ -0.34
CCNC-213ENST00000523541 TRAV30A0A087WSZ9 112 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 RPS10-NUDT3A0A1W2PQS6 291 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 TMEM50AO95807 157 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 SULT1A3P0DMM9 295 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 SULT1A4P0DMN0 295 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 TMEM128Q5BJH2 165 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 SPINK9Q5DT21 86 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 SPANXN2Q5MJ10 180 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 CASC10Q5T4H9 136 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 OR4X1Q8NH49 305 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 RNASEH2CQ8TDP1 164 aaKnown RBP12.91□□□□□ -0.34
CCNC-213ENST00000523541 TMEM230Q96A57 120 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 HEYLQ9NQ87 328 aaPredicted RBP12.91□□□□□ -0.34
CCNC-213ENST00000523541 CACNG5Q9UF02 275 aa12.91□□□□□ -0.34
CCNC-213ENST00000523541 IGHV7-4-1A0A0J9YVY3 117 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 DUXBA0A1W2PPF3 345 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 RBMY1BA6NDE4 496 aaKnown RBP12.9□□□□□ -0.34
CCNC-213ENST00000523541 RBMY1EA6NEQ0 496 aaKnown RBP12.9□□□□□ -0.34
CCNC-213ENST00000523541 OR4C46A6NHA9 309 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 YIF1AO95070 293 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 RBMY1DP0C7P1 496 aaKnown RBP12.9□□□□□ -0.34
CCNC-213ENST00000523541 AKR1C4P17516 323 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 CCR6P51684 374 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 ATP5IP56385 69 aaPredicted RBP12.9□□□□□ -0.34
CCNC-213ENST00000523541 C2orf83Q53S99 150 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 NMSQ5H8A3 153 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 ZNF600Q6ZNG1 722 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 LGI3Q8N145 548 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 TMEM116Q8NCL8 245 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 HIPK2Q9H2X6 1198 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 RETNQ9HD89 108 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 NDUFA13Q9P0J0 144 aa12.9□□□□□ -0.34
CCNC-213ENST00000523541 IGHV3OR16-8A0A075B7F1 116 aa12.89□□□□□ -0.35
CCNC-213ENST00000523541 CHEK1O14757 476 aa12.89□□□□□ -0.35
CCNC-213ENST00000523541 CLN5O75503 358 aa12.89□□□□□ -0.35
CCNC-213ENST00000523541 SUPT4H1P63272 117 aaKnown RBP12.89□□□□□ -0.35
CCNC-213ENST00000523541 ZNF79Q15937 498 aa12.89□□□□□ -0.35
CCNC-213ENST00000523541 ZNF414Q96IQ9 312 aa12.89□□□□□ -0.35
CCNC-213ENST00000523541 RHPN1-AS1Q9BWJ2 59 aa12.89□□□□□ -0.35
CCNC-213ENST00000523541 U3KQ87 197 aa12.89□□□□□ -0.35
CCNC-213ENST00000523541 LOC102724200A0A096LPH7 203 aaPredicted RBP12.88□□□□□ -0.35
CCNC-213ENST00000523541 A0A1B0GU03 582 aa12.88□□□□□ -0.35
CCNC-213ENST00000523541 CEBPZOSA8MTT3 80 aa12.88□□□□□ -0.35
CCNC-213ENST00000523541 ZNF207O43670 478 aaKnown RBP12.88□□□□□ -0.35
CCNC-213ENST00000523541 SLC25A4P12235 298 aa12.88□□□□□ -0.35
CCNC-213ENST00000523541 OPRK1P41145 380 aa12.88□□□□□ -0.35
CCNC-213ENST00000523541 SMCO1Q147U7 214 aa12.88□□□□□ -0.35
CCNC-213ENST00000523541 ETFRF1Q6IPR1 90 aa12.88□□□□□ -0.35
CCNC-213ENST00000523541 TOMM20LQ6UXN7 152 aa12.88□□□□□ -0.35
CCNC-213ENST00000523541 EDA2RQ9HAV5 297 aa12.88□□□□□ -0.35
CCNC-213ENST00000523541 IGHV3-48P01763 117 aa12.87□□□□□ -0.35
CCNC-213ENST00000523541 PAFAH1B2P68402 229 aa12.87□□□□□ -0.35
CCNC-213ENST00000523541 LRTM2Q8N967 370 aa12.87□□□□□ -0.35
CCNC-213ENST00000523541 GGTLC1Q9BX51 225 aa12.87□□□□□ -0.35
CCNC-213ENST00000523541 FNDC4Q9H6D8 234 aaPredicted RBP12.87□□□□□ -0.35
CCNC-213ENST00000523541 TMEM231Q9H6L2 316 aa12.87□□□□□ -0.35
CCNC-213ENST00000523541 HSPB7Q9UBY9 170 aa12.87□□□□□ -0.35
CCNC-213ENST00000523541 A0A1W2PS18 150 aa12.86□□□□□ -0.35
CCNC-213ENST00000523541 NAP1L6A6NFF2 107 aa12.86□□□□□ -0.35
CCNC-213ENST00000523541 SLC25A6P12236 298 aa12.86□□□□□ -0.35
CCNC-213ENST00000523541 TNFRSF9Q07011 255 aa12.86□□□□□ -0.35
CCNC-213ENST00000523541 FAM90A2PQ658T7 463 aa12.86□□□□□ -0.35
CCNC-213ENST00000523541 LYZL2Q7Z4W2 148 aa12.86□□□□□ -0.35
CCNC-213ENST00000523541 SLC24A4Q8NFF2 622 aa12.86□□□□□ -0.35
CCNC-213ENST00000523541 IL17DQ8TAD2 202 aa12.86□□□□□ -0.35
CCNC-213ENST00000523541 RNF2Q99496 336 aa12.86□□□□□ -0.35
CCNC-213ENST00000523541 VSIRQ9H7M9 311 aa12.86□□□□□ -0.35
CCNC-213ENST00000523541 PUS1Q9Y606 427 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCNC-213ENST00000523541 UBE2CO00762 179 aa12.85□□□□□ -0.35
CCNC-213ENST00000523541 NPPCP23582 126 aa12.85□□□□□ -0.35
CCNC-213ENST00000523541 UBE2MP61081 183 aaKnown RBP12.85□□□□□ -0.35
CCNC-213ENST00000523541 SRRQ9GZT4 340 aa12.85□□□□□ -0.35
CCNC-213ENST00000523541 UBQLN2Q9UHD9 624 aa12.85□□□□□ -0.35
CCNC-213ENST00000523541 TRAV2A0A0B4J234 112 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 KIR2DL5BA0A0G2JN68 375 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 KIR2DL5BA0A0G2JPC4 375 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 NPY1RP25929 384 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 APOC4P55056 127 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 RBMS2Q15434 407 aaKnown RBP12.84□□□□□ -0.35
CCNC-213ENST00000523541 TMED4Q7Z7H5 227 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 KIR2DL5AQ8N109 375 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 OR1S2Q8NGQ3 325 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 KIR2DL5BQ8NHK3 375 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 ZFAND3Q9H8U3 227 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 TMED3Q9Y3Q3 217 aa12.84□□□□□ -0.35
CCNC-213ENST00000523541 FAM90A26D6RGX4 464 aa12.83□□□□□ -0.36
CCNC-213ENST00000523541 INPP1P49441 399 aa12.83□□□□□ -0.36
CCNC-213ENST00000523541 YPEL3P61236 119 aaPredicted RBP12.83□□□□□ -0.36
CCNC-213ENST00000523541 MLANAQ16655 118 aa12.83□□□□□ -0.36
CCNC-213ENST00000523541 PRSS54Q6PEW0 395 aa12.83□□□□□ -0.36
CCNC-213ENST00000523541 Q6ZWC4 215 aa12.83□□□□□ -0.36
CCNC-213ENST00000523541 DTD1Q8TEA8 209 aa12.83□□□□□ -0.36
CCNC-213ENST00000523541 Q8WTZ3 238 aa12.83□□□□□ -0.36
CCNC-213ENST00000523541 NARS2Q96I59 477 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms