RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 BAALC-AS2P0C853 105 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 SPI1P17947 270 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 BRS3P32247 399 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 RPL5P46777 297 aaKnown RBP0.4□□□□□ -2.35
PCM1-217ENST00000522998 SULT1A1P50225 295 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 SPANXN5Q5MJ07 72 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 CCDC122Q5T0U0 273 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 LPCAT3Q6P1A2 487 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 LINC00311Q8N616 119 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 COMMD5Q9GZQ3 224 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 C11orf68Q9H3H3 251 aaKnown RBP0.4□□□□□ -2.35
PCM1-217ENST00000522998 ECM29Q5VYK3 1845 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 SCN8AQ9UQD0 1980 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 TRAV9-1A0A075B6T8 112 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 IGKV1-9A0A0C4DH69 117 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 EXOC1LA0A1B0GW35 172 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 PQLC2LA1A4F0 135 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 CHP2O43745 196 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 HYPMO75409 117 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 OR2J2O76002 312 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 TTRP02766 147 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 IFNA16P05015 189 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 SMIM10L2AP0DMW4 78 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 SMIM10L2BP0DMW5 78 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 RPS20P60866 119 aaKnown RBP0.39□□□□□ -2.35
PCM1-217ENST00000522998 RAB4BP61018 213 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 RHEBQ15382 184 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 KCNJ8Q15842 424 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 C8orf74Q6P047 294 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 DPPA3Q6W0C5 159 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 BPIFA4PQ86YQ2 179 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 CLVS1Q8IUQ0 354 aaPredicted RBP0.39□□□□□ -2.35
PCM1-217ENST00000522998 ANKRD29Q8N6D5 301 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 SIGLECL1Q8N7X8 197 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 TET1Q8NFU7 2136 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 OR4E2Q8NGC2 313 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 OR5A1Q8NGJ0 315 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 ZNF418Q8TF45 676 aaPredicted RBP0.39□□□□□ -2.35
PCM1-217ENST00000522998 GINS4Q9BRT9 223 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 DCSTAMPQ9H295 470 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 SLC39A9Q9NUM3 307 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 TAS2R4Q9NYW5 299 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 VPS29Q9UBQ0 182 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 NEO1Q92859 1461 aa0.39□□□□□ -2.35
PCM1-217ENST00000522998 TRBV6-7A0A0A0MS04 114 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 TRAV26-2A0A0B4J265 109 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 OR4C46A6NHA9 309 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 NIPSNAP2O75323 286 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 LYZL6O75951 148 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 OR2B3O76000 313 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 TNNC2P02585 160 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 ZNF93P35789 620 aaPredicted RBP0.38□□□□□ -2.35
PCM1-217ENST00000522998 CDC42P60953 191 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 RHOGP84095 191 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 KHDC3LQ587J8 217 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 HIST3H2BBQ8N257 126 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 C12orf45Q8N5I9 185 aaPredicted RBP0.38□□□□□ -2.35
PCM1-217ENST00000522998 Q8N814 137 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 ARL5BQ96KC2 179 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 OBSCN-AS1Q96MR7 158 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 PARD6GQ9BYG4 376 aaPredicted RBP0.38□□□□□ -2.35
PCM1-217ENST00000522998 ULBP3Q9BZM4 244 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 HS3ST2Q9Y278 367 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 ERGIC3Q9Y282 383 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 PKIGQ9Y2B9 76 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 ZFP30Q9Y2G7 519 aa0.38□□□□□ -2.35
PCM1-217ENST00000522998 NOSIPQ9Y314 301 aaKnown RBP0.38□□□□□ -2.35
PCM1-217ENST00000522998 OBSL1O75147 1896 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 HECW2Q9P2P5 1572 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 ADCY9O60503 1353 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 ROBO3Q96MS0 1386 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 TRAV12-1A0A0B4J245 112 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 TRAV1-1A0A0B4J248 108 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 CLDN24A6NM45 220 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 KPNA3O00505 521 aaPredicted RBP0.37□□□□□ -2.35
PCM1-217ENST00000522998 INE1O15225 51 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 UBL3O95164 117 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 SSR2P43308 183 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 CNBPP62633 177 aaKnown RBP0.37□□□□□ -2.35
PCM1-217ENST00000522998 IAH1Q2TAA2 248 aaPredicted RBP0.37□□□□□ -2.35
PCM1-217ENST00000522998 PTRHD1Q6GMV3 140 aaKnown RBP0.37□□□□□ -2.35
PCM1-217ENST00000522998 SPOPLQ6IQ16 392 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 OOSP2Q86WS3 158 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 OTUD6BQ8N6M0 293 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 CLDN22Q8N7P3 220 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 OR52R1Q8NGF1 315 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 OR10J5Q8NHC4 309 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 DNAJC9Q8WXX5 260 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 DCUN1D1Q96GG9 259 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 KLK9Q9UKQ9 250 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 PLXNA4Q9HCM2 1894 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 FREM3P0C091 2139 aa0.37□□□□□ -2.35
PCM1-217ENST00000522998 AHNAKQ09666 5890 aaKnown RBP0.36□□□□□ -2.35
PCM1-217ENST00000522998 TAF1LQ8IZX4 1826 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 MUC5BQ9HC84 5762 aaPredicted RBP0.36□□□□□ -2.35
PCM1-217ENST00000522998 HECW1Q76N89 1606 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 A0A087WUJ7 227 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 SMIM23A6NLE4 172 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 CNIH1O95406 144 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 RBP1P09455 135 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms