RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 ZNF436Q9C0F3 470 aaPredicted RBP16.6■□□□□ 0.25
HOXA3-205ENST00000522456 FAM240BA0A1B0GVZ2 78 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 PITX3O75364 302 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 UPK1BO75841 260 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 EDN2P20800 178 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 CBLN1P23435 193 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 FCGR2BP31994 310 aaPredicted RBP16.59■□□□□ 0.25
HOXA3-205ENST00000522456 ADMP35318 185 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 NPBWR1P48145 328 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 TM4SF20Q53R12 229 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 C2orf83Q53S99 150 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 ASCL2Q99929 193 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 NUDT15Q9NV35 164 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 TBC1D24Q9ULP9 559 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 UFC1Q9Y3C8 167 aa16.59■□□□□ 0.25
HOXA3-205ENST00000522456 A8MWP6 167 aa16.58■□□□□ 0.24
HOXA3-205ENST00000522456 ADAP1O75689 374 aa16.58■□□□□ 0.24
HOXA3-205ENST00000522456 IFNA10P01566 189 aa16.58■□□□□ 0.24
HOXA3-205ENST00000522456 ASAH1Q13510 395 aa16.58■□□□□ 0.24
HOXA3-205ENST00000522456 MLANAQ16655 118 aa16.58■□□□□ 0.24
HOXA3-205ENST00000522456 NOXA1Q86UR1 476 aa16.58■□□□□ 0.24
HOXA3-205ENST00000522456 CACNG8Q8WXS5 425 aa16.58■□□□□ 0.24
HOXA3-205ENST00000522456 HUWE1Q7Z6Z7 4374 aaKnown RBP16.57■□□□□ 0.24
HOXA3-205ENST00000522456 TMEM213A2RRL7 107 aa16.57■□□□□ 0.24
HOXA3-205ENST00000522456 NDUFA4O00483 81 aa16.57■□□□□ 0.24
HOXA3-205ENST00000522456 IFNA21P01568 189 aa16.57■□□□□ 0.24
HOXA3-205ENST00000522456 NPY1RP25929 384 aa16.57■□□□□ 0.24
HOXA3-205ENST00000522456 RELQ04864 619 aaPredicted RBP16.57■□□□□ 0.24
HOXA3-205ENST00000522456 LCN12Q6JVE5 192 aa16.57■□□□□ 0.24
HOXA3-205ENST00000522456 UXS1Q8NBZ7 420 aa16.57■□□□□ 0.24
HOXA3-205ENST00000522456 OR52B4Q8NGK2 314 aa16.57■□□□□ 0.24
HOXA3-205ENST00000522456 C20orf24Q9BUV8 137 aa16.57■□□□□ 0.24
HOXA3-205ENST00000522456 FNDC4Q9H6D8 234 aaPredicted RBP16.57■□□□□ 0.24
HOXA3-205ENST00000522456 SMAD5-AS1Q9Y6J3 95 aa16.57■□□□□ 0.24
HOXA3-205ENST00000522456 U3KQ87 197 aa16.57■□□□□ 0.24
HOXA3-205ENST00000522456 RPS10-NUDT3A0A1W2PQS6 291 aa16.56■□□□□ 0.24
HOXA3-205ENST00000522456 C3orf84H3BNL1 204 aa16.56■□□□□ 0.24
HOXA3-205ENST00000522456 YIF1AO95070 293 aa16.56■□□□□ 0.24
HOXA3-205ENST00000522456 H2AFB2P0C5Z0 115 aa16.56■□□□□ 0.24
HOXA3-205ENST00000522456 ELLP55199 621 aaPredicted RBP16.56■□□□□ 0.24
HOXA3-205ENST00000522456 DEFB114Q30KQ6 69 aa16.56■□□□□ 0.24
HOXA3-205ENST00000522456 CD300EQ496F6 205 aaPredicted RBP16.56■□□□□ 0.24
HOXA3-205ENST00000522456 OR2K2Q8NGT1 345 aa16.56■□□□□ 0.24
HOXA3-205ENST00000522456 RNASEH2CQ8TDP1 164 aaKnown RBP16.56■□□□□ 0.24
HOXA3-205ENST00000522456 TMEM190Q8WZ59 177 aa16.56■□□□□ 0.24
HOXA3-205ENST00000522456 TECRQ9NZ01 308 aaKnown RBP16.56■□□□□ 0.24
HOXA3-205ENST00000522456 IGHV3OR16-8A0A075B7F1 116 aa16.55■□□□□ 0.24
HOXA3-205ENST00000522456 IZUMO1RA6ND01 250 aa16.55■□□□□ 0.24
HOXA3-205ENST00000522456 FAM90A26D6RGX4 464 aa16.55■□□□□ 0.24
HOXA3-205ENST00000522456 MED6O75586 246 aa16.55■□□□□ 0.24
HOXA3-205ENST00000522456 MITD1Q8WV92 249 aa16.55■□□□□ 0.24
HOXA3-205ENST00000522456 TMEM170AQ8WVE7 144 aa16.55■□□□□ 0.24
HOXA3-205ENST00000522456 MARC2Q969Z3 335 aa16.55■□□□□ 0.24
HOXA3-205ENST00000522456 MRPL27Q9P0M9 148 aaKnown RBP16.55■□□□□ 0.24
HOXA3-205ENST00000522456 SELENOKQ9Y6D0 94 aa16.55■□□□□ 0.24
HOXA3-205ENST00000522456 TMEM50AO95807 157 aa16.54■□□□□ 0.24
HOXA3-205ENST00000522456 IFITM3Q01628 133 aa16.54■□□□□ 0.24
HOXA3-205ENST00000522456 OR4X1Q8NH49 305 aa16.54■□□□□ 0.24
HOXA3-205ENST00000522456 MAGT1Q9H0U3 335 aa16.54■□□□□ 0.24
HOXA3-205ENST00000522456 DAZ1Q9NQZ3 744 aaKnown RBP16.54■□□□□ 0.24
HOXA3-205ENST00000522456 MRPL36Q9P0J6 103 aaKnown RBP16.54■□□□□ 0.24
HOXA3-205ENST00000522456 STAB2Q8WWQ8 2551 aa16.54■□□□□ 0.24
HOXA3-205ENST00000522456 MPTX1A8MV57 137 aa16.53■□□□□ 0.24
HOXA3-205ENST00000522456 IAPPP10997 89 aa16.53■□□□□ 0.24
HOXA3-205ENST00000522456 ETFRF1Q6IPR1 90 aa16.53■□□□□ 0.24
HOXA3-205ENST00000522456 ENKURQ8TC29 256 aa16.53■□□□□ 0.24
HOXA3-205ENST00000522456 MLXQ9UH92 298 aa16.53■□□□□ 0.24
HOXA3-205ENST00000522456 K7EMT4 169 aa16.52■□□□□ 0.24
HOXA3-205ENST00000522456 ZNF207O43670 478 aaKnown RBP16.52■□□□□ 0.24
HOXA3-205ENST00000522456 SYNGR2O43760 224 aa16.52■□□□□ 0.24
HOXA3-205ENST00000522456 CLN5O75503 358 aa16.52■□□□□ 0.24
HOXA3-205ENST00000522456 SCGB2A1O75556 95 aa16.52■□□□□ 0.24
HOXA3-205ENST00000522456 IFNA4P05014 189 aa16.52■□□□□ 0.24
HOXA3-205ENST00000522456 C8orf88P0DMB2 117 aa16.52■□□□□ 0.24
HOXA3-205ENST00000522456 SLC25A4P12235 298 aa16.52■□□□□ 0.24
HOXA3-205ENST00000522456 ATP5IP56385 69 aaPredicted RBP16.52■□□□□ 0.24
HOXA3-205ENST00000522456 SEC22CQ9BRL7 303 aa16.52■□□□□ 0.24
HOXA3-205ENST00000522456 RYR2Q92736 4967 aa16.51■□□□□ 0.23
HOXA3-205ENST00000522456 DNAH7Q8WXX0 4024 aa16.51■□□□□ 0.23
HOXA3-205ENST00000522456 C15orf62A8K5M9 175 aa16.51■□□□□ 0.23
HOXA3-205ENST00000522456 WRBO00258 174 aa16.51■□□□□ 0.23
HOXA3-205ENST00000522456 GUCA2BQ16661 112 aa16.51■□□□□ 0.23
HOXA3-205ENST00000522456 BTNL8Q6UX41 500 aa16.51■□□□□ 0.23
HOXA3-205ENST00000522456 ZNF431Q8TF32 576 aaPredicted RBP16.51■□□□□ 0.23
HOXA3-205ENST00000522456 CIB3Q96Q77 187 aaPredicted RBP16.51■□□□□ 0.23
HOXA3-205ENST00000522456 PAIP2BQ9ULR5 123 aaKnown RBP16.51■□□□□ 0.23
HOXA3-205ENST00000522456 DYNC2H1Q8NCM8 4307 aaKnown RBP16.5■□□□□ 0.23
HOXA3-205ENST00000522456 TRAV30A0A087WSZ9 112 aa16.5■□□□□ 0.23
HOXA3-205ENST00000522456 RND2P52198 227 aa16.5■□□□□ 0.23
HOXA3-205ENST00000522456 RPP30P78346 268 aaKnown RBP16.5■□□□□ 0.23
HOXA3-205ENST00000522456 PRSS54Q6PEW0 395 aa16.5■□□□□ 0.23
HOXA3-205ENST00000522456 ZNF600Q6ZNG1 722 aa16.5■□□□□ 0.23
HOXA3-205ENST00000522456 GTSCR1Q86UQ5 136 aa16.5■□□□□ 0.23
HOXA3-205ENST00000522456 ZNF414Q96IQ9 312 aa16.5■□□□□ 0.23
HOXA3-205ENST00000522456 ZNF785A8K8V0 405 aa16.49■□□□□ 0.23
HOXA3-205ENST00000522456 NKX2-1P43699 371 aaPredicted RBP16.49■□□□□ 0.23
HOXA3-205ENST00000522456 DEFA1P59665 94 aa16.49■□□□□ 0.23
HOXA3-205ENST00000522456 DEFA3P59666 94 aa16.49■□□□□ 0.23
HOXA3-205ENST00000522456 RAB11AP62491 216 aa16.49■□□□□ 0.23
HOXA3-205ENST00000522456 ID3Q02535 119 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms