RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 BTN1A1Q13410 526 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 EBI3Q14213 229 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 PLGLAQ15195 96 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 DEFB112Q30KQ8 113 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 Q8N6K4 173 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 ZNF114Q8NC26 417 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 RNASEH2CQ8TDP1 164 aaKnown RBP11.49□□□□□ -0.57
CLN8-204ENST00000519254 SSX3Q99909 188 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 FNDC4Q9H6D8 234 aaPredicted RBP11.49□□□□□ -0.57
CLN8-204ENST00000519254 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
CLN8-204ENST00000519254 SRP19P09132 144 aaKnown RBP11.49□□□□□ -0.57
CLN8-204ENST00000519254 RPL29P47914 159 aaKnown RBP11.49□□□□□ -0.57
CLN8-204ENST00000519254 MFAP2P55001 183 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 BPIFB3P59826 476 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 RAB31Q13636 194 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 PMS2P11Q13670 270 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 SLC16A13Q7RTY0 426 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 MRPL41Q8IXM3 137 aaKnown RBP11.49□□□□□ -0.57
CLN8-204ENST00000519254 STPG3Q8N7X2 389 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 OR2T6Q8NHC8 308 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 RXFP4Q8TDU9 374 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 SRSF12Q8WXF0 261 aaKnown RBP11.49□□□□□ -0.57
CLN8-204ENST00000519254 NKX6-2Q9C056 277 aaPredicted RBP11.49□□□□□ -0.57
CLN8-204ENST00000519254 MEGF9Q9H1U4 602 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 SLC45A2Q9UMX9 530 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 FLNBO75369 2602 aaKnown RBP11.49□□□□□ -0.57
CLN8-204ENST00000519254 H3BUX3 64 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 LINC00869P0C866 280 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 APELAP0DMC3 54 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 SRP14P37108 136 aaKnown RBP11.48□□□□□ -0.57
CLN8-204ENST00000519254 CDC34P49427 236 aaPredicted RBP11.48□□□□□ -0.57
CLN8-204ENST00000519254 B2MP61769 119 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 PRR20EP86478 221 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 PRR20CP86479 221 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 PRR20DP86480 221 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 PRR20BP86481 221 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 PRR20AP86496 221 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 KHDC3LQ587J8 217 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 CSPG4Q6UVK1 2322 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 TMEM219Q86XT9 240 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 TEX15Q9BXT5 2789 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 TMPRSS5Q9H3S3 457 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 KCNIP2Q9NS61 270 aa11.48□□□□□ -0.57
CLN8-204ENST00000519254 ZFP92A6NM28 416 aa11.47□□□□□ -0.57
CLN8-204ENST00000519254 HSPB1P04792 205 aaKnown RBP11.47□□□□□ -0.57
CLN8-204ENST00000519254 BCL2P10415 239 aa11.47□□□□□ -0.57
CLN8-204ENST00000519254 NPBWR1P48145 328 aa11.47□□□□□ -0.57
CLN8-204ENST00000519254 LY6EQ16553 131 aa11.47□□□□□ -0.57
CLN8-204ENST00000519254 C5orf64Q2M2E5 130 aa11.47□□□□□ -0.57
CLN8-204ENST00000519254 LY6G6DO95868 133 aa11.46□□□□□ -0.57
CLN8-204ENST00000519254 OR10J1P30954 320 aa11.46□□□□□ -0.57
CLN8-204ENST00000519254 TEX29Q8N6K0 151 aa11.46□□□□□ -0.57
CLN8-204ENST00000519254 SLC35E1Q96K37 410 aa11.46□□□□□ -0.57
CLN8-204ENST00000519254 OTOGQ6ZRI0 2925 aa11.46□□□□□ -0.57
CLN8-204ENST00000519254 SNAPINO95295 136 aa11.46□□□□□ -0.58
CLN8-204ENST00000519254 CNIH1O95406 144 aa11.46□□□□□ -0.58
CLN8-204ENST00000519254 CRYGCP07315 174 aa11.46□□□□□ -0.58
CLN8-204ENST00000519254 CD99P14209 185 aa11.46□□□□□ -0.58
CLN8-204ENST00000519254 OR1P1Q8NH06 330 aa11.46□□□□□ -0.58
CLN8-204ENST00000519254 PIFOQ8TCI5 191 aa11.46□□□□□ -0.58
CLN8-204ENST00000519254 ACY3Q96HD9 319 aa11.46□□□□□ -0.58
CLN8-204ENST00000519254 TNFRSF19Q9NS68 423 aa11.46□□□□□ -0.58
CLN8-204ENST00000519254 MRPL36Q9P0J6 103 aaKnown RBP11.46□□□□□ -0.58
CLN8-204ENST00000519254 DMRT1Q9Y5R6 373 aa11.46□□□□□ -0.58
CLN8-204ENST00000519254 F11RQ9Y624 299 aaKnown RBP11.46□□□□□ -0.58
CLN8-204ENST00000519254 ACANP16112 2415 aa11.45□□□□□ -0.58
CLN8-204ENST00000519254 A0A1W2PPV4 95 aa11.45□□□□□ -0.58
CLN8-204ENST00000519254 CYSRT1A8MQ03 144 aa11.45□□□□□ -0.58
CLN8-204ENST00000519254 DNASE2O00115 360 aaPredicted RBP11.45□□□□□ -0.58
CLN8-204ENST00000519254 IGHV3-48P01763 117 aa11.45□□□□□ -0.58
CLN8-204ENST00000519254 HNF1AP20823 631 aa11.45□□□□□ -0.58
CLN8-204ENST00000519254 SOHLH1Q5JUK2 328 aa11.45□□□□□ -0.58
CLN8-204ENST00000519254 C9orf139Q6ZV77 190 aa11.45□□□□□ -0.58
CLN8-204ENST00000519254 Q71RC1 249 aaPredicted RBP11.45□□□□□ -0.58
CLN8-204ENST00000519254 CLRN3Q8NCR9 226 aa11.45□□□□□ -0.58
CLN8-204ENST00000519254 SRSF8Q9BRL6 282 aaKnown RBP11.45□□□□□ -0.58
CLN8-204ENST00000519254 FAM74A7A6NL05 159 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 IGHV4-59P01825 116 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 GATA2P23769 480 aaPredicted RBP11.44□□□□□ -0.58
CLN8-204ENST00000519254 FXYD3Q14802 87 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 FAM74A3Q4VXF1 159 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 CYB561D1Q8N8Q1 229 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.44□□□□□ -0.58
CLN8-204ENST00000519254 ABHD5Q8WTS1 349 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 GATAD1Q8WUU5 269 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 NPIPB3Q92617 1050 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 MISP3Q96FF7 219 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 ZNF48Q96MX3 618 aaPredicted RBP11.44□□□□□ -0.58
CLN8-204ENST00000519254 SLC25A33Q9BSK2 321 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 VAX2Q9UIW0 290 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 IGKV1D-37A0A075B6S9 117 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 IFNA1P01562 189 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 RBMS3Q6XE24 437 aaKnown RBP11.44□□□□□ -0.58
CLN8-204ENST00000519254 SLC35E3Q7Z769 313 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 THAP8Q8NA92 274 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 TMUB1Q9BVT8 246 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 SEPSECSQ9HD40 501 aaKnown RBP11.44□□□□□ -0.58
CLN8-204ENST00000519254 C1RLQ9NZP8 487 aa11.44□□□□□ -0.58
CLN8-204ENST00000519254 SH2D7A6NKC9 451 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms