RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 SEC11CQ9BY50 192 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 WDR61Q9GZS3 305 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 VSIRQ9H7M9 311 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 DYNLRB1Q9NP97 96 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 TMEM106BQ9NUM4 274 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 RPUSD1Q9UJJ7 312 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 GAB2Q9UQC2 676 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 LINC00312Q9Y6C7 94 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 ITPR1Q14643 2758 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 PPIAL4EA0A075B759 164 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 TRAV38-1A0A0B4J264 116 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 LOC105371267A0A1B0GV96 52 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 hADV38S2A0JD32 116 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 PPIAL4DF5H284 164 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 CCL21O00585 134 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 HPRT1P00492 218 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 IFNA5P01569 189 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 IGKV1D-33P01593 117 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 IGKV1-33P01594 117 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 PPIAL4FP0DN26 164 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 CCL3L1P16619 93 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 NFYBP25208 207 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 CHRNB4P30926 498 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 ID1P41134 155 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 VDAC2P45880 294 aaPredicted RBP3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 PPT1P50897 306 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 RAB2AP61019 212 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 HBG1P69891 147 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 HBG2P69892 147 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 MRPS11P82912 194 aaKnown RBP3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 RPL36AP83881 106 aaKnown RBP3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 MEF2CQ06413 473 aaPredicted RBP3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 TFF3Q07654 80 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 RIGQ13278 110 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 POU2AF1Q16633 256 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 HAGHQ16775 308 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 TMEM155Q4W5P6 130 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 AKR1C8PQ5T2L2 129 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 OR8G2PQ6IF36 304 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 DPPA3Q6W0C5 159 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 SLC25A48Q6ZT89 311 aaKnown RBP3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 SSX9Q7RTT3 188 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 H2BFWTQ7Z2G1 175 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 SVBPQ8N300 66 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 Q8N7P7 452 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 LFNGQ8NES3 379 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 OR4S2Q8NH73 311 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 CD300LFQ8TDQ1 290 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 TAF15Q92804 592 aaKnown RBP eCLIP3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 PSMG3Q9BT73 122 aaPredicted RBP3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 MRPL20Q9BYC9 149 aaKnown RBP3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 PRORYQ9H606 182 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 PLEKHA3Q9HB20 300 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 FBXO7Q9Y3I1 522 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 PPIAL4AQ9Y536 164 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 PKD1L2Q7Z442 2459 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 DSCAML1Q8TD84 2053 aa3.79□□□□□ -1.8
CTNNA1-212ENST00000518919 TPRP12270 2363 aaKnown RBP3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 TANC2Q9HCD6 1990 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 ARFGEF3Q5TH69 2177 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 TRAV1-1A0A0B4J248 108 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 CEBPZOSA8MTT3 80 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 K7EQM0 130 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 KALRNO60229 2985 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 EIF3GO75821 320 aaKnown RBP eCLIP3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 OPN1MWP04001 364 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 CT45A6P0DMU7 189 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 CT45A5P0DMU8 189 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 CT45A7P0DMV0 189 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 OPN1MW2P0DN77 364 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 OPN1MW3P0DN78 364 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 NQO2P16083 231 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 MDKP21741 143 aaPredicted RBP3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 FGF7P21781 194 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 SPCS3P61009 180 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 ERVK-16P61578 105 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 RPL31P62899 125 aaKnown RBP3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF506Q5JVG8 444 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 HEPN1Q6WQI6 88 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF833PQ6ZTB9 187 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 LYG1Q8N1E2 194 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 OR10A7Q8NGE5 316 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 OR52E5Q8NH55 327 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 CLDND2Q8NHS1 167 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF596Q8TC21 504 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 CCL17Q92583 94 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 ADTRPQ96IZ2 230 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF714Q96N38 554 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 CIB3Q96Q77 187 aaPredicted RBP3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 RARRES2Q99969 163 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 CLEC7AQ9BXN2 247 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 GAL3ST2Q9H3Q3 398 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 RPRMQ9NS64 109 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 TMEM14BQ9NUH8 114 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 KAAG1Q9UBP8 84 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 TCF19Q9Y242 345 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 PRELID3BQ9Y3B1 194 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 TIMM9Q9Y5J7 89 aa3.78□□□□□ -1.8
CTNNA1-212ENST00000518919 KLF2Q9Y5W3 355 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms