RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	OR4C46	A6NHA9	309 aa		18.15	■□□□□ 0.5
CNOT7-204	ENST00000518885	CD5	P06127	495 aa		18.15	■□□□□ 0.5
CNOT7-204	ENST00000518885	CCR6	P51684	374 aa		18.15	■□□□□ 0.5
CNOT7-204	ENST00000518885		Q6ZRM9	215 aa		18.15	■□□□□ 0.5
CNOT7-204	ENST00000518885	OR10C1	Q96KK4	312 aa		18.15	■□□□□ 0.5
CNOT7-204	ENST00000518885	NDUFA13	Q9P0J0	144 aa		18.15	■□□□□ 0.5
CNOT7-204	ENST00000518885	SHPK	Q9UHJ6	478 aa		18.15	■□□□□ 0.5
CNOT7-204	ENST00000518885	TRAV14DV4	A0A0A6YYC5	116 aa		18.14	■□□□□ 0.49
CNOT7-204	ENST00000518885	IGHV3-48	P01763	117 aa		18.14	■□□□□ 0.49
CNOT7-204	ENST00000518885	ZNF79	Q15937	498 aa		18.14	■□□□□ 0.49
CNOT7-204	ENST00000518885	TMEM128	Q5BJH2	165 aa		18.14	■□□□□ 0.49
CNOT7-204	ENST00000518885	ZNF600	Q6ZNG1	722 aa		18.14	■□□□□ 0.49
CNOT7-204	ENST00000518885	TMED4	Q7Z7H5	227 aa		18.14	■□□□□ 0.49
CNOT7-204	ENST00000518885	TMEM116	Q8NCL8	245 aa		18.14	■□□□□ 0.49
CNOT7-204	ENST00000518885	TMEM230	Q96A57	120 aa		18.14	■□□□□ 0.49
CNOT7-204	ENST00000518885	SMPX	Q9UHP9	88 aa		18.14	■□□□□ 0.49
CNOT7-204	ENST00000518885	TRAV30	A0A087WSZ9	112 aa		18.13	■□□□□ 0.49
CNOT7-204	ENST00000518885	IGHV7-4-1	A0A0J9YVY3	117 aa		18.13	■□□□□ 0.49
CNOT7-204	ENST00000518885	DUXB	A0A1W2PPF3	345 aa		18.13	■□□□□ 0.49
CNOT7-204	ENST00000518885	BSX	Q3C1V8	233 aa		18.13	■□□□□ 0.49
CNOT7-204	ENST00000518885	RNASEH2C	Q8TDP1	164 aa	Known RBP	18.13	■□□□□ 0.49
CNOT7-204	ENST00000518885	SELENOK	Q9Y6D0	94 aa		18.13	■□□□□ 0.49
CNOT7-204	ENST00000518885	ZNF207	O43670	478 aa	Known RBP	18.12	■□□□□ 0.49
CNOT7-204	ENST00000518885	SMCO1	Q147U7	214 aa		18.12	■□□□□ 0.49
CNOT7-204	ENST00000518885	TRIQK	Q629K1	86 aa		18.12	■□□□□ 0.49
CNOT7-204	ENST00000518885	ETFRF1	Q6IPR1	90 aa		18.12	■□□□□ 0.49
CNOT7-204	ENST00000518885	LINC00322	Q6ZN03	302 aa	Predicted RBP	18.12	■□□□□ 0.49
CNOT7-204	ENST00000518885	SLC24A4	Q8NFF2	622 aa		18.12	■□□□□ 0.49
CNOT7-204	ENST00000518885	CITED4	Q96RK1	184 aa		18.12	■□□□□ 0.49
CNOT7-204	ENST00000518885	IGHV3OR16-8	A0A075B7F1	116 aa		18.11	■□□□□ 0.49
CNOT7-204	ENST00000518885	TMEM50A	O95807	157 aa		18.11	■□□□□ 0.49
CNOT7-204	ENST00000518885	CMC4	P56277	68 aa	Predicted RBP	18.11	■□□□□ 0.49
CNOT7-204	ENST00000518885	C2orf83	Q53S99	150 aa		18.11	■□□□□ 0.49
CNOT7-204	ENST00000518885	OR4X1	Q8NH49	305 aa		18.11	■□□□□ 0.49
CNOT7-204	ENST00000518885	MUC7	Q8TAX7	377 aa		18.11	■□□□□ 0.49
CNOT7-204	ENST00000518885	RHPN1-AS1	Q9BWJ2	59 aa		18.11	■□□□□ 0.49
CNOT7-204	ENST00000518885	TMEM231	Q9H6L2	316 aa		18.11	■□□□□ 0.49
CNOT7-204	ENST00000518885	NAP1L6	A6NFF2	107 aa		18.1	■□□□□ 0.49
CNOT7-204	ENST00000518885	CLN5	O75503	358 aa		18.1	■□□□□ 0.49
CNOT7-204	ENST00000518885	SLC25A4	P12235	298 aa		18.1	■□□□□ 0.49
CNOT7-204	ENST00000518885	VAMP1	P23763	118 aa		18.1	■□□□□ 0.49
CNOT7-204	ENST00000518885	SUPT4H1	P63272	117 aa	Known RBP	18.1	■□□□□ 0.49
CNOT7-204	ENST00000518885	PAFAH1B2	P68402	229 aa		18.1	■□□□□ 0.49
CNOT7-204	ENST00000518885	NMS	Q5H8A3	153 aa		18.1	■□□□□ 0.49
CNOT7-204	ENST00000518885	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885		A0A1B0GU03	582 aa		18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	CHEK1	O14757	476 aa		18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	ATP5I	P56385	69 aa	Predicted RBP	18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	TNFRSF9	Q07011	255 aa		18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	RBMS2	Q15434	407 aa	Known RBP	18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	TOMM20L	Q6UXN7	152 aa		18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	LYZL2	Q7Z4W2	148 aa		18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	NARS2	Q96I59	477 aa	Known RBP	18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	FAM110A	Q9BQ89	295 aa		18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	GGTLC1	Q9BX51	225 aa		18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	WFDC10A	Q9H1F0	79 aa		18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	PUS1	Q9Y606	427 aa	Known RBP eCLIP	18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885		U3KQ87	197 aa		18.09	■□□□□ 0.49
CNOT7-204	ENST00000518885	RBMY1B	A6NDE4	496 aa	Known RBP	18.08	■□□□□ 0.48
CNOT7-204	ENST00000518885	RBMY1E	A6NEQ0	496 aa	Known RBP	18.08	■□□□□ 0.48
CNOT7-204	ENST00000518885	CENPX	A8MT69	81 aa		18.08	■□□□□ 0.48
CNOT7-204	ENST00000518885	RBMY1D	P0C7P1	496 aa	Known RBP	18.08	■□□□□ 0.48
CNOT7-204	ENST00000518885	NPY1R	P25929	384 aa		18.08	■□□□□ 0.48
CNOT7-204	ENST00000518885	CENPS	Q8N2Z9	138 aa		18.08	■□□□□ 0.48
CNOT7-204	ENST00000518885	OR1S1	Q8NH92	325 aa		18.08	■□□□□ 0.48
CNOT7-204	ENST00000518885	SRR	Q9GZT4	340 aa		18.08	■□□□□ 0.48
CNOT7-204	ENST00000518885	PRR13	Q9NZ81	148 aa		18.08	■□□□□ 0.48
CNOT7-204	ENST00000518885	HSPB7	Q9UBY9	170 aa		18.08	■□□□□ 0.48
CNOT7-204	ENST00000518885		A0A1W2PS18	150 aa		18.07	■□□□□ 0.48
CNOT7-204	ENST00000518885	IFNA10	P01566	189 aa		18.07	■□□□□ 0.48
CNOT7-204	ENST00000518885	UBE2M	P61081	183 aa	Known RBP	18.07	■□□□□ 0.48
CNOT7-204	ENST00000518885	DTD1	Q8TEA8	209 aa		18.07	■□□□□ 0.48
CNOT7-204	ENST00000518885	RNF2	Q99496	336 aa		18.07	■□□□□ 0.48
CNOT7-204	ENST00000518885	LYL1	P12980	280 aa		18.06	■□□□□ 0.48
CNOT7-204	ENST00000518885	LRTM2	Q8N967	370 aa		18.06	■□□□□ 0.48
CNOT7-204	ENST00000518885	OR1S2	Q8NGQ3	325 aa		18.06	■□□□□ 0.48
CNOT7-204	ENST00000518885	METTL26	Q96S19	204 aa		18.06	■□□□□ 0.48
CNOT7-204	ENST00000518885	FNDC4	Q9H6D8	234 aa	Predicted RBP	18.06	■□□□□ 0.48
CNOT7-204	ENST00000518885	HUWE1	Q7Z6Z7	4374 aa	Known RBP	18.05	■□□□□ 0.48
CNOT7-204	ENST00000518885	NXPH3	O95157	252 aa		18.05	■□□□□ 0.48
CNOT7-204	ENST00000518885	NPPC	P23582	126 aa		18.05	■□□□□ 0.48
CNOT7-204	ENST00000518885	APOC4	P55056	127 aa		18.05	■□□□□ 0.48
CNOT7-204	ENST00000518885	TMED3	Q9Y3Q3	217 aa		18.05	■□□□□ 0.48
CNOT7-204	ENST00000518885	SLC25A6	P12236	298 aa		18.04	■□□□□ 0.48
CNOT7-204	ENST00000518885	C7orf50	Q9BRJ6	194 aa	Known RBP	18.04	■□□□□ 0.48
CNOT7-204	ENST00000518885	IGHV3-49	A0A0A0MS15	119 aa		18.03	■□□□□ 0.48
CNOT7-204	ENST00000518885	MED6	O75586	246 aa		18.03	■□□□□ 0.48
CNOT7-204	ENST00000518885	SFT2D2	O95562	160 aa		18.03	■□□□□ 0.48
CNOT7-204	ENST00000518885		Q8WTZ3	238 aa		18.03	■□□□□ 0.48
CNOT7-204	ENST00000518885	GRAMD2B	Q96HH9	432 aa		18.03	■□□□□ 0.48
CNOT7-204	ENST00000518885	RBKS	Q9H477	322 aa		18.03	■□□□□ 0.48
CNOT7-204	ENST00000518885	ZFAND3	Q9H8U3	227 aa		18.03	■□□□□ 0.48
CNOT7-204	ENST00000518885	FAM90A26	D6RGX4	464 aa		18.02	■□□□□ 0.48
CNOT7-204	ENST00000518885	OR10J1	P30954	320 aa		18.02	■□□□□ 0.48
CNOT7-204	ENST00000518885	EIF2B2	P49770	351 aa	Known RBP	18.02	■□□□□ 0.48
CNOT7-204	ENST00000518885	RND2	P52198	227 aa		18.02	■□□□□ 0.48
CNOT7-204	ENST00000518885	PRSS54	Q6PEW0	395 aa		18.02	■□□□□ 0.48
CNOT7-204	ENST00000518885	TCF24	Q7RTU0	167 aa		18.02	■□□□□ 0.48
CNOT7-204	ENST00000518885	IL17D	Q8TAD2	202 aa		18.02	■□□□□ 0.48
CNOT7-204	ENST00000518885	ZNF414	Q96IQ9	312 aa		18.02	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms