RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 CHD3Q12873 2000 aaKnown RBP-0.3□□□□□ -2.46
PCM1-208ENST00000518877 UBR5O95071 2799 aaPredicted RBP-0.3□□□□□ -2.46
PCM1-208ENST00000518877 DCCP43146 1447 aa-0.3□□□□□ -2.46
PCM1-208ENST00000518877 HECW1Q76N89 1606 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 KIF13BQ9NQT8 1826 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 A0A0D9SG52 128 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 PQLC2LA1A4F0 135 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 CXCR6O00574 342 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 BAALC-AS2P0C853 105 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 COX5BP10606 129 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 RPS12P25398 132 aaKnown RBP-0.31□□□□□ -2.46
PCM1-208ENST00000518877 IFITM2Q01629 132 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 CAV1Q03135 178 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 RPL22L1Q6P5R6 122 aaKnown RBP-0.31□□□□□ -2.46
PCM1-208ENST00000518877 MIR17HGQ75NE6 70 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 IQCF2Q8IXL9 164 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 TMEM156Q8N614 296 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 GPR32P1Q8NGA4 272 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 OR51D1Q8NGF3 324 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 TSKUQ8WUA8 353 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 OPTNQ96CV9 577 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 OR51I1Q9H343 314 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 C11orf68Q9H3H3 251 aaKnown RBP-0.31□□□□□ -2.46
PCM1-208ENST00000518877 EPDR1Q9UM22 224 aa-0.31□□□□□ -2.46
PCM1-208ENST00000518877 PHRF1Q9P1Y6 1649 aaKnown RBP-0.31□□□□□ -2.46
PCM1-208ENST00000518877 HSBP1L1C9JCN9 74 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 K7EIL1 84 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 COX6A1P12074 109 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 NAA20P61599 178 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 SKP1P63208 163 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 HBA1P69905 142 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 CLVS2Q5SYC1 327 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 Q6ZS49 121 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 SIGLECL1Q8N7X8 197 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 OR10J5Q8NHC4 309 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 MRPL30Q8TCC3 161 aaKnown RBP-0.32□□□□□ -2.46
PCM1-208ENST00000518877 PRRT1Q99946 306 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 FAM96AQ9H5X1 160 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 XPNPEP1Q9NQW7 623 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 RASL12Q9NYN1 266 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 C3orf18Q9UK00 162 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 KNTC1P50748 2209 aa-0.32□□□□□ -2.46
PCM1-208ENST00000518877 DOCK5Q9H7D0 1870 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 MACF1Q9UPN3 7388 aaKnown RBP-0.33□□□□□ -2.46
PCM1-208ENST00000518877 TRAV9-1A0A075B6T8 112 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 CCL16O15467 120 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 SSNA1O43805 119 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 CALUO43852 315 aaPredicted RBP-0.33□□□□□ -2.46
PCM1-208ENST00000518877 C8orf88P0DMB2 117 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 DEFA1P59665 94 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 CDC42P60953 191 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 PMAIP1Q13794 54 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 BATFQ16520 125 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 LINC00322Q6ZN03 302 aaPredicted RBP-0.33□□□□□ -2.46
PCM1-208ENST00000518877 OR13C4Q8NGS5 318 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 OR13D1Q8NGV5 346 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 MCFD2Q8NI22 146 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 H1FXQ92522 213 aaKnown RBP-0.33□□□□□ -2.46
PCM1-208ENST00000518877 CMTM5Q96DZ9 223 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 MIXL1Q9H2W2 232 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 FBXL12Q9NXK8 326 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 RIC1Q4ADV7 1423 aa-0.33□□□□□ -2.46
PCM1-208ENST00000518877 TRBV6-4A0A1B0GX49 114 aa-0.34□□□□□ -2.46
PCM1-208ENST00000518877 ERICH2A1L162 156 aa-0.34□□□□□ -2.46
PCM1-208ENST00000518877 TLCD2A6NGC4 264 aa-0.34□□□□□ -2.46
PCM1-208ENST00000518877 HOXA6P31267 233 aa-0.34□□□□□ -2.46
PCM1-208ENST00000518877 RPS20P60866 119 aaKnown RBP-0.34□□□□□ -2.46
PCM1-208ENST00000518877 CLEC6AQ6EIG7 209 aa-0.34□□□□□ -2.46
PCM1-208ENST00000518877 RAB8BQ92930 207 aa-0.34□□□□□ -2.46
PCM1-208ENST00000518877 TAS2R7Q9NYW3 318 aa-0.34□□□□□ -2.46
PCM1-208ENST00000518877 UBAP1Q9NZ09 502 aa-0.34□□□□□ -2.46
PCM1-208ENST00000518877 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.34□□□□□ -2.46
PCM1-208ENST00000518877 EVC2Q86UK5 1308 aa-0.35□□□□□ -2.46
PCM1-208ENST00000518877 PLXNA4Q9HCM2 1894 aa-0.35□□□□□ -2.46
PCM1-208ENST00000518877 NSD1Q96L73 2696 aaPredicted RBP-0.35□□□□□ -2.47
PCM1-208ENST00000518877 HECW2Q9P2P5 1572 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 EEF1E1-BLOC1S5C9J1V9 151 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 FAAHO00519 579 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 HIST3H2BBQ8N257 126 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 TMEM86BQ8N661 226 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 NIPSNAP1Q9BPW8 284 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 OR51V1Q9H2C8 321 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 HS3ST2Q9Y278 367 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 ERGIC3Q9Y282 383 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 PKIGQ9Y2B9 76 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 V9GYY5 206 aaPredicted RBP-0.35□□□□□ -2.47
PCM1-208ENST00000518877 PLXND1Q9Y4D7 1925 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 ABCC11Q96J66 1382 aa-0.35□□□□□ -2.47
PCM1-208ENST00000518877 FANCMQ8IYD8 2048 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 H0Y980 276 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 OR2J2O76002 312 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 IGLV3-1P01715 115 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 OCMP0CE72 109 aaPredicted RBP-0.36□□□□□ -2.47
PCM1-208ENST00000518877 TCL1AP56279 114 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 RAB5BP61020 215 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 LRRN1Q6UXK5 716 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 Q8IYB0 196 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 EXOC3-AS1Q8N2X6 119 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 LRRC25Q8N386 305 aaPredicted RBP-0.36□□□□□ -2.47
PCM1-208ENST00000518877 OR8D4Q8NGM9 314 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms