RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 SLC2A1P11166 492 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 NQO1P15559 274 aaKnown RBP2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZNF3P17036 446 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 ATF1P18846 271 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 ACTBP60709 375 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 PRSS8Q16651 343 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR2T2Q6IF00 324 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZFP1Q6P2D0 407 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 ORMDL3Q8N138 153 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR8A1Q8NGG7 326 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR13D1Q8NGV5 346 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 DTD1Q8TEA8 209 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 MRAP2Q96G30 205 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 TMEM38BQ9NVV0 291 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 KAAG1Q9UBP8 84 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 RNF11Q9Y3C5 154 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 TRAV10A0A0B4J240 114 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 I3L521 148 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 DEFB4AO15263 64 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 ENTPD6O75354 484 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR2A4O95047 310 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 AKR1C4P17516 323 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 BTN1A1Q13410 526 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 MADCAM1Q13477 382 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 C1orf140Q5VVS0 124 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 Q8N402 240 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 LFNGQ8NES3 379 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 DYNC2LI1Q8TCX1 351 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 SPACA5Q96QH8 159 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR2A7Q96R45 310 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZNF391Q9UJN7 358 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 TP53TG1Q9Y2A0 90 aa2.94□□□□□ -1.94
HMGB1P23-201ENST00000518743 IGHV1-3A0A0C4DH29 117 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 IZUMO1RA6ND01 250 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 M0QXV9 152 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 LIMS3P0CW19 117 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 LIMS4P0CW20 117 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZNF32P17041 273 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 PVALBP20472 110 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 KRTAP10-1P60331 282 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 HBG1P69891 147 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 HBG2P69892 147 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR8G1Q15617 311 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR10J3Q5JRS4 329 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 UBE2NLQ5JXB2 153 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZNF826PQ6ZT77 177 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 SH2D6Q7Z4S9 175 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 C10orf107Q8IVU9 208 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 ENTHD1Q8IYW4 607 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR5T1Q8NG75 326 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR10G2Q8NGC3 310 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR5H2Q8NGV7 314 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 C16orf78Q8WTQ4 265 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR5P2Q8WZ92 322 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 ITFG2Q969R8 447 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 L3HYPDHQ96EM0 354 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 YPEL4Q96NS1 127 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 CCDC115Q96NT0 180 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 PRSS27Q9BQR3 290 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZNF426Q9BUY5 554 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 C1orf50Q9BV19 199 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 C21orf62Q9NYP8 219 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 USE1Q9NZ43 259 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 SLC35A3Q9Y2D2 325 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 CBY1Q9Y3M2 126 aa2.93□□□□□ -1.94
HMGB1P23-201ENST00000518743 LOC389332A0A1B0GUA5 103 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 PGPA6NDG6 321 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 FABP12A6NFH5 140 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 TMEM114B3SHH9 223 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 MAGEB4O15481 346 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZNF207O43670 478 aaKnown RBP2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 COX7A2P2O60397 106 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 IGLV2-8P01709 118 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 ORM1P02763 201 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 HMGN2P05204 90 aaKnown RBP2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 TFPTP0C1Z6 253 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 SCGB1C2P0DMR2 95 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 CBX5P45973 191 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 TAS2R43P59537 309 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 UBE2G2P60604 165 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 MAGOHP61326 146 aaKnown RBP2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 RUNX1Q01196 453 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 ATP5G2Q06055 141 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 Q499Y3 187 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 LDLRAD2Q5SZI1 272 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZNF684Q5T5D7 378 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 FAM162BQ5T6X4 162 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 FAM222AQ5U5X8 452 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 Q5W150 140 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 MORN3Q6PF18 240 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 HMGN2P46Q86SG4 172 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR2AE1Q8NHA4 323 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 SCGB1C1Q8TD33 95 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 RNASEH2CQ8TDP1 164 aaKnown RBP2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 STACQ99469 402 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 SDHCQ99643 169 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZNF430Q9H8G1 570 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 GLTPQ9NZD2 209 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 YTHDF2Q9Y5A9 579 aaKnown RBP2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 RFNGQ9Y644 331 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms