RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 MYBPHLA2RUH7 354 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 FAM90A18PA6NE21 464 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 FAM90A16PA6NEW6 464 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 MANSC4A6NHS7 340 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 FAM90A8PA6NJQ4 464 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 FAM90A9PA6NNJ1 464 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 F2Z2F3 143 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 RRHO14718 337 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 SRSF10O75494 262 aaKnown RBP3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 TUSC2O75896 110 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 C1orf105O95561 183 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 NTN1O95631 604 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 NCR2O95944 276 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 IGLV3-27P01718 113 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 MGST1P10620 155 aaKnown RBP3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 CD27P26842 260 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 FCGR2BP31994 310 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 CAMPP49913 170 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 CLDN17P56750 224 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 FHL1Q13642 323 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 RRN3P1Q2M238 152 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 SP6Q3SY56 376 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 CXorf66Q5JRM2 361 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 DGAT2L6Q6ZPD8 337 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 H1FNTQ75WM6 255 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 PLXDC1Q8IUK5 500 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 CEND1Q8N111 149 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 GAPTQ8N292 157 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 C3orf22Q8N5N4 141 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 OR1L8Q8NGR8 309 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 OSR1Q8TAX0 266 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 ACER1Q8TDN7 264 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 SLC37A2Q8TED4 501 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 ST8SIA1Q92185 356 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 DDB2Q92466 427 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 ARPC1AQ92747 370 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 BADQ92934 168 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 FLYWCH2Q96CP2 140 aaKnown RBP3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 DNAJA3Q96EY1 480 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 COQ2Q96H96 371 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 AMELYQ99218 206 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 HSD17B10Q99714 261 aaKnown RBP3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 PRORYQ9H606 182 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 TMEM167BQ9NRX6 74 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 VWA8A3KMH1 1905 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 PLXNB3Q9ULL4 1909 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 TRAV24A0A0B4J272 114 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 A0A1W2PQF6 199 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 SHISA7A6NL88 538 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 PRR32B1ATL7 298 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 M0R2P5 195 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 TIMM8AO60220 97 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 CRLF1O75462 422 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 PPYP01298 95 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 BGLAPP02818 100 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 IL4P05112 153 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 LINC00694P0DN24 101 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 FGF6P10767 208 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 MYOD1P15172 320 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 RPL7P18124 248 aaKnown RBP3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 NPPCP23582 126 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 CNTFRP26992 372 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 RPS15AP62244 130 aaKnown RBP3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 SRYQ05066 204 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 MLF2Q15773 248 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 CDKN3Q16667 212 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 POM121L1PQ3SYA9 428 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 C6orf226Q5I0X4 101 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 CFAP126Q5VTH2 177 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 SLC35E4Q6ICL7 350 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 HSD11B1LQ7Z5J1 315 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZDHHC23Q8IYP9 409 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 C8orf31Q8N9H6 132 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 SSC4DQ8WTU2 575 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 COPS9Q8WXC6 57 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 RASL10AQ92737 203 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 C8orf44Q96CB5 159 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 LINC00526Q96FQ7 95 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 KIR2DL4Q99706 377 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 NUDT22Q9BRQ3 303 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 FAM234AQ9H0X4 552 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 VSIRQ9H7M9 311 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 PRO0461Q9UI25 63 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 PRNDQ9UKY0 176 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 PROCRQ9UNN8 238 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 B9D1Q9UPM9 204 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 WNT6Q9Y6F9 365 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 KIF26BQ2KJY2 2108 aa3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 NUP210Q8TEM1 1887 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P19-201ENST00000517578 DOCK9Q9BZ29 2069 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 A0A1B0GTH9 108 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 FEZF1A0PJY2 475 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 PRSS37A4D1T9 235 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 NDUFS7O75251 213 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 ATP5LO75964 103 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 ACYP1P07311 99 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 RGRP47804 291 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 SPINT3P49223 89 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 RBM11P57052 281 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms