RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 CORTO00230 105 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 TMEM50AO95807 157 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 VAMP1P23763 118 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 BTCP35070 178 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 HTR2BP41595 481 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 NPBWR1P48145 328 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 TNFRSF9Q07011 255 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 RBMS2Q15434 407 aaKnown RBP11.8□□□□□ -0.52
SERF1B-208ENST00000515588 DEFB125Q8N687 156 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 OR10C1Q96KK4 312 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 HSPB7Q9UBY9 170 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 FLVCR2Q9UPI3 526 aa11.8□□□□□ -0.52
SERF1B-208ENST00000515588 TRAV25A0A0B4J276 109 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 NAP1L6A6NFF2 107 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 YIF1AO95070 293 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 NDUFB6O95139 128 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 SFT2D2O95562 160 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 IL7P13232 177 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 OPRK1P41145 380 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 INPP1P49441 399 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 HAGHQ16775 308 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 C2orf83Q53S99 150 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 LINC00322Q6ZN03 302 aaPredicted RBP11.79□□□□□ -0.52
SERF1B-208ENST00000515588 CENPSQ8N2Z9 138 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 LRTM2Q8N967 370 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 SLC24A4Q8NFF2 622 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 WWC2-AS2Q96NR7 200 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 TM2D3Q9BRN9 247 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 TUBA4BQ9H853 241 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 SMPXQ9UHP9 88 aa11.79□□□□□ -0.52
SERF1B-208ENST00000515588 A0A1B0GU03 582 aa11.78□□□□□ -0.52
SERF1B-208ENST00000515588 DUXBA0A1W2PPF3 345 aa11.78□□□□□ -0.52
SERF1B-208ENST00000515588 RBMY1BA6NDE4 496 aaKnown RBP11.78□□□□□ -0.52
SERF1B-208ENST00000515588 RBMY1EA6NEQ0 496 aaKnown RBP11.78□□□□□ -0.52
SERF1B-208ENST00000515588 OR11H12B2RN74 326 aa11.78□□□□□ -0.52
SERF1B-208ENST00000515588 PITX3O75364 302 aa11.78□□□□□ -0.52
SERF1B-208ENST00000515588 RBMY1DP0C7P1 496 aaKnown RBP11.78□□□□□ -0.52
SERF1B-208ENST00000515588 RBPMS2Q6ZRY4 209 aaKnown RBP11.78□□□□□ -0.52
SERF1B-208ENST00000515588 OR4X1Q8NH49 305 aa11.78□□□□□ -0.52
SERF1B-208ENST00000515588 RCHY1Q96PM5 261 aa11.78□□□□□ -0.52
SERF1B-208ENST00000515588 RBKSQ9H477 322 aa11.78□□□□□ -0.52
SERF1B-208ENST00000515588 CACFD1Q9UGQ2 172 aa11.78□□□□□ -0.52
SERF1B-208ENST00000515588 IGHV3-49A0A0A0MS15 119 aa11.77□□□□□ -0.53
SERF1B-208ENST00000515588 IGHV7-4-1A0A0J9YVY3 117 aa11.77□□□□□ -0.53
SERF1B-208ENST00000515588 CHEK1O14757 476 aa11.77□□□□□ -0.53
SERF1B-208ENST00000515588 TSPAN4O14817 238 aa11.77□□□□□ -0.53
SERF1B-208ENST00000515588 CLN5O75503 358 aa11.77□□□□□ -0.53
SERF1B-208ENST00000515588 OR52B4Q8NGK2 314 aa11.77□□□□□ -0.53
SERF1B-208ENST00000515588 RNASEH2CQ8TDP1 164 aaKnown RBP11.77□□□□□ -0.53
SERF1B-208ENST00000515588 RHPN1-AS1Q9BWJ2 59 aa11.77□□□□□ -0.53
SERF1B-208ENST00000515588 HIPK2Q9H2X6 1198 aa11.77□□□□□ -0.53
SERF1B-208ENST00000515588 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.53
SERF1B-208ENST00000515588 PUS1Q9Y606 427 aaKnown RBP eCLIP11.77□□□□□ -0.53
SERF1B-208ENST00000515588 IGHV3OR16-13A0A075B7E8 117 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 TRAV14DV4A0A0A6YYC5 116 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 IGHV3-74A0A0B4J1X5 117 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 C9orf170A2RU37 121 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 PLA2G10O15496 165 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 IGKV1-17P01599 117 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 NPY1RP25929 384 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 ZNF600Q6ZNG1 722 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 SLC16A13Q7RTY0 426 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 TMEM116Q8NCL8 245 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 OR1S1Q8NH92 325 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 DTD1Q8TEA8 209 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 RNF2Q99496 336 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 SPAG8Q99932 426 aaPredicted RBP11.76□□□□□ -0.53
SERF1B-208ENST00000515588 ZMAT4Q9H898 229 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 SRD5A3Q9H8P0 318 aa11.76□□□□□ -0.53
SERF1B-208ENST00000515588 PIGBOS1A0A0B4J2F0 54 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 RPS10-NUDT3A0A1W2PQS6 291 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 A6NHS1 94 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 APOHP02749 345 aaPredicted RBP11.75□□□□□ -0.53
SERF1B-208ENST00000515588 HOXB5P09067 269 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 ANXA7P20073 488 aaKnown RBP11.75□□□□□ -0.53
SERF1B-208ENST00000515588 RND2P52198 227 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 UBE2MP61081 183 aaKnown RBP11.75□□□□□ -0.53
SERF1B-208ENST00000515588 TIGITQ495A1 244 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 LAMTOR1Q6IAA8 161 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 LILRB2Q8N423 598 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 CITED4Q96RK1 184 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 C7orf50Q9BRJ6 194 aaKnown RBP11.75□□□□□ -0.53
SERF1B-208ENST00000515588 TMED3Q9Y3Q3 217 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 U3KQ87 197 aa11.75□□□□□ -0.53
SERF1B-208ENST00000515588 IFNA10P01566 189 aa11.74□□□□□ -0.53
SERF1B-208ENST00000515588 SLC25A6P12236 298 aa11.74□□□□□ -0.53
SERF1B-208ENST00000515588 CNPY1Q3B7I2 92 aa11.74□□□□□ -0.53
SERF1B-208ENST00000515588 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
SERF1B-208ENST00000515588 GGNBP1Q5YKI7 109 aa11.74□□□□□ -0.53
SERF1B-208ENST00000515588 FAM90A2PQ658T7 463 aa11.74□□□□□ -0.53
SERF1B-208ENST00000515588 ST8SIA2Q92186 375 aa11.74□□□□□ -0.53
SERF1B-208ENST00000515588 VSIRQ9H7M9 311 aa11.74□□□□□ -0.53
SERF1B-208ENST00000515588 DNAH7Q8WXX0 4024 aa11.73□□□□□ -0.53
SERF1B-208ENST00000515588 CENPXA8MT69 81 aa11.73□□□□□ -0.53
SERF1B-208ENST00000515588 OR4E1P0C645 316 aa11.73□□□□□ -0.53
SERF1B-208ENST00000515588 IGLC1P0CG04 106 aa11.73□□□□□ -0.53
SERF1B-208ENST00000515588 SLC25A4P12235 298 aa11.73□□□□□ -0.53
SERF1B-208ENST00000515588 DHRS2Q13268 280 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms