RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 IGSF23A1L1A6 192 aa16.24■□□□□ 0.19
LSM6-207ENST00000515311 ADARB2-AS1A8MUL3 147 aa16.24■□□□□ 0.19
LSM6-207ENST00000515311 IGHV3-11P01762 117 aa16.24■□□□□ 0.19
LSM6-207ENST00000515311 SULT1A1P50225 295 aa16.24■□□□□ 0.19
LSM6-207ENST00000515311 KLHL30-AS1Q8NEE0 82 aa16.24■□□□□ 0.19
LSM6-207ENST00000515311 OR10P1Q8NGE3 313 aa16.24■□□□□ 0.19
LSM6-207ENST00000515311 CCDC140Q96MF4 163 aa16.24■□□□□ 0.19
LSM6-207ENST00000515311 TXN2Q99757 166 aa16.24■□□□□ 0.19
LSM6-207ENST00000515311 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.23■□□□□ 0.19
LSM6-207ENST00000515311 NUDT19A8MXV4 375 aa16.23■□□□□ 0.19
LSM6-207ENST00000515311 I3L521 148 aa16.23■□□□□ 0.19
LSM6-207ENST00000515311 MFAP4P55083 255 aa16.23■□□□□ 0.19
LSM6-207ENST00000515311 BAXQ07812 192 aa16.23■□□□□ 0.19
LSM6-207ENST00000515311 HIST2H2BDQ6DRA6 164 aa16.23■□□□□ 0.19
LSM6-207ENST00000515311 OR8G2PQ6IF36 304 aa16.23■□□□□ 0.19
LSM6-207ENST00000515311 SLC16A13Q7RTY0 426 aa16.23■□□□□ 0.19
LSM6-207ENST00000515311 GAR1Q9NY12 217 aaKnown RBP16.23■□□□□ 0.19
LSM6-207ENST00000515311 IGHV3-21A0A0B4J1V1 117 aa16.22■□□□□ 0.19
LSM6-207ENST00000515311 CST7O76096 145 aa16.22■□□□□ 0.19
LSM6-207ENST00000515311 EWSR1Q01844 656 aaKnown RBP eCLIP16.22■□□□□ 0.19
LSM6-207ENST00000515311 HAPLN4Q86UW8 402 aa16.22■□□□□ 0.19
LSM6-207ENST00000515311 TMEM116Q8NCL8 245 aa16.22■□□□□ 0.19
LSM6-207ENST00000515311 GGACTQ9BVM4 153 aa16.22■□□□□ 0.19
LSM6-207ENST00000515311 S4R3C0 116 aa16.22■□□□□ 0.19
LSM6-207ENST00000515311 A0A1W2PRX2 142 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 FNDC10F2Z333 226 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 F8W735 103 aaPredicted RBP16.21■□□□□ 0.19
LSM6-207ENST00000515311 IGHV3-48P01763 117 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 RPL12P30050 165 aaKnown RBP16.21■□□□□ 0.19
LSM6-207ENST00000515311 HBG1P69891 147 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 HBG2P69892 147 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 DLK1P80370 383 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 ARL16Q0P5N6 197 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 MLANAQ16655 118 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 ACSM6Q6P461 480 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 C18orf65Q6ZTR6 163 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 ACOT7LQ6ZUV0 252 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 OR4X1Q8NH49 305 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 OR5B12Q96R08 314 aa16.21■□□□□ 0.19
LSM6-207ENST00000515311 FXYD6-FXYD2A0A087WZ82 144 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 SMLR1H3BR10 107 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 IGHV3-23P01764 117 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 S100A11P31949 105 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 NPBWR1P48145 328 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 SLC38A11Q08AI6 406 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 NSUN5P1Q3KNT7 163 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 ZNF546Q86UE3 836 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 BSCL2Q96G97 398 aaPredicted RBP16.2■□□□□ 0.18
LSM6-207ENST00000515311 SLC35E1Q96K37 410 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 AQP10Q96PS8 301 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 MRPL36Q9P0J6 103 aaKnown RBP16.2■□□□□ 0.18
LSM6-207ENST00000515311 PEF1Q9UBV8 284 aaKnown RBP16.2■□□□□ 0.18
LSM6-207ENST00000515311 TNFSF18Q9UNG2 199 aa16.2■□□□□ 0.18
LSM6-207ENST00000515311 NUP62P37198 522 aaPredicted RBP16.19■□□□□ 0.18
LSM6-207ENST00000515311 RND2P52198 227 aa16.19■□□□□ 0.18
LSM6-207ENST00000515311 GAMTQ14353 236 aa16.19■□□□□ 0.18
LSM6-207ENST00000515311 Q56UQ5 140 aa16.19■□□□□ 0.18
LSM6-207ENST00000515311 SPSB3Q6PJ21 355 aa16.19■□□□□ 0.18
LSM6-207ENST00000515311 CLEC19AQ6UXS0 136 aa16.19■□□□□ 0.18
LSM6-207ENST00000515311 C8orf86Q6ZUL3 223 aa16.19■□□□□ 0.18
LSM6-207ENST00000515311 TMEM217Q8N7C4 229 aa16.19■□□□□ 0.18
LSM6-207ENST00000515311 UBAC2Q8NBM4 344 aa16.19■□□□□ 0.18
LSM6-207ENST00000515311 INO80EQ8NBZ0 244 aaPredicted RBP16.19■□□□□ 0.18
LSM6-207ENST00000515311 NEURL2Q9BR09 285 aa16.19■□□□□ 0.18
LSM6-207ENST00000515311 HSPB11Q9Y547 144 aa16.19■□□□□ 0.18
LSM6-207ENST00000515311 ANKRD34BA5PLL1 514 aa16.18■□□□□ 0.18
LSM6-207ENST00000515311 CLN5O75503 358 aa16.18■□□□□ 0.18
LSM6-207ENST00000515311 HSPB1P04792 205 aaKnown RBP16.18■□□□□ 0.18
LSM6-207ENST00000515311 CLEC3BP05452 202 aa16.18■□□□□ 0.18
LSM6-207ENST00000515311 GPR183P32249 361 aa16.18■□□□□ 0.18
LSM6-207ENST00000515311 NHLH2Q02577 135 aa16.18■□□□□ 0.18
LSM6-207ENST00000515311 ACY3Q96HD9 319 aa16.18■□□□□ 0.18
LSM6-207ENST00000515311 OR2T8A6NH00 312 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 HMSDA8MTL9 139 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 TGOLN2O43493 480 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 GNG7O60262 68 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 SCGB2A1O75556 95 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 TRBV12-3P01733 135 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 ATP6V1FQ16864 119 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 LILRB2Q8N423 598 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 OR1S2Q8NGQ3 325 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 NPIPB3Q92617 1050 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 ZC4H2Q9NQZ6 224 aa16.17■□□□□ 0.18
LSM6-207ENST00000515311 TRAV30A0A087WSZ9 112 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 BMPR1BO00238 502 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 C1QBP02746 253 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 CTSGP08311 255 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 ARL3P36405 182 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 ZNF616Q08AN1 781 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 FHL3Q13643 280 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 VWC2Q2TAL6 325 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 DEFB136Q30KP8 78 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 OR4F17Q8NGA8 305 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 OR11H4Q8NGC9 324 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 OR5C1Q8NGR4 320 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 OR1N2Q8NGR9 330 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 RAX2Q96IS3 184 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 OR4F4Q96R69 305 aa16.16■□□□□ 0.18
LSM6-207ENST00000515311 IGHV4OR15-8A0A075B7B6 117 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 A0A087WW49 117 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms