RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ODAMA1E959 279 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 SH2D1BO14796 132 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 HLA-HP01893 362 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 SLC38A11Q08AI6 406 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 C11orf71Q6IPW1 123 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 MOB1BQ7L9L4 216 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 CCL19Q99731 98 aa6.01□□□□□ -1.45
CLIP1-205ENST00000514271 TECRQ9NZ01 308 aaKnown RBP6.01□□□□□ -1.45
CLIP1-205ENST00000514271 HIVEP3Q5T1R4 2406 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6□□□□□ -1.45
CLIP1-205ENST00000514271 TSPOP30536 169 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 FXYD4P59646 89 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 PPP1CBP62140 327 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 POU2AF1Q16633 256 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 COL5A1-AS1Q5SY13 56 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 GGTLC1Q9BX51 225 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 SIRPDQ9H106 197 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 IQCF6A8MYZ5 107 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 A8MZ25 164 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 H7BYZ3 331 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 OMGP23515 440 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 CRYBA4P53673 196 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 FOXG1P55316 489 aaPredicted RBP6□□□□□ -1.45
CLIP1-205ENST00000514271 FOXE3Q13461 319 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 C5orf47Q569G3 176 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 NPRL2Q8WTW4 380 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 TSKUQ8WUA8 353 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 PRSS22Q9GZN4 317 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 CDC42EP3Q9UKI2 254 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 TRBV7-9A0A0J9YWB2 115 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 NPIPB6E9PJ23 425 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 MPDU1O75352 247 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 EGR1P18146 543 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 CD33P20138 364 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 DEFB113Q30KQ7 82 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 EBLN2Q6P2I7 272 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 ZNF841Q6ZN19 808 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 TEX29Q8N6K0 151 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 SMIM12Q96EX1 92 aa6□□□□□ -1.45
CLIP1-205ENST00000514271 DOPEY1Q5JWR5 2465 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 OR5B21A6NL26 309 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 CEBPZOSA8MTT3 80 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 E7EQL1 145 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 ISLRO14498 428 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 SYNGR1O43759 233 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 SLC25A16P16260 332 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 PAX2Q02962 417 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 MRGPRG-AS1Q2M3A8 158 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 LRRC10Q5BKY1 277 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 C9orf135Q5VTT2 229 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 LCN15Q6UWW0 184 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 C2orf91Q6ZV80 131 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 CMTM2Q8TAZ6 248 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 DNAJC4Q9NNZ3 241 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 OSTCQ9NRP0 149 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 MPC1Q9Y5U8 109 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 LINC00473A8K010 186 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 SIAH2O43255 324 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 IFNA1P01562 189 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 PRR14LQ5THK1 2151 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 ZNF562Q6V9R5 426 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 FAM167A-AS1Q96KT0 104 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 MS4A10Q96PG2 267 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 GPER1Q99527 375 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 MLST8Q9BVC4 326 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 UBTD1Q9HAC8 227 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 TRAPPC1Q9Y5R8 145 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 ZNF462Q96JM2 2506 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 SVILO95425 2214 aa5.99□□□□□ -1.45
CLIP1-205ENST00000514271 DSPP15924 2871 aaKnown RBP5.98□□□□□ -1.45
CLIP1-205ENST00000514271 TRAV30A0A087WSZ9 112 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 A0A1B0GV50 99 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 C5orf49A4QMS7 147 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 C11orf94C9JXX5 98 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 PAGE4O60829 102 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 KRASP01116 189 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 C3orf79P0CE67 100 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 SCGB1A1P11684 91 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 RAB9AP51151 201 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 EFNA4P52798 201 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 HBG1P69891 147 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 HBG2P69892 147 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 OR5I1Q13606 314 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 QTRT1Q9BXR0 403 aaKnown RBP5.98□□□□□ -1.45
CLIP1-205ENST00000514271 SCRT2Q9NQ03 307 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 ATRXP46100 2492 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 A0A1B0GV72 72 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 TCF21O43680 179 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 CA2P00918 260 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 IFNA5P01569 189 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 MMDQ15546 238 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 ADIRFQ15847 76 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 MRPL23Q16540 153 aaKnown RBP5.98□□□□□ -1.45
CLIP1-205ENST00000514271 DEFB125Q8N687 156 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 C18orf32Q8TCD1 76 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 MRPL18Q9H0U6 180 aaKnown RBP5.98□□□□□ -1.45
CLIP1-205ENST00000514271 DYNLRB1Q9NP97 96 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 LAMTOR2Q9Y2Q5 125 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 KLF12Q9Y4X4 402 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 F5H5K5 113 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms