RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 RPS4Y1P22090 263 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 CATR1Q13166 79 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 DAZAP2Q15038 168 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 RPL22L1Q6P5R6 122 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 OR4S1Q8NGB4 309 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 OR10D4PQ8NGN7 298 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 RARRES3Q9UL19 164 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 TDRD6O60522 2096 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 PCNX3Q9H6A9 2034 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 TMEM72A0PK05 275 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 RFXAPO00287 272 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 GSTZ1O43708 216 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 GNG4P50150 75 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 ZNF83P51522 516 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 RPL23P62829 140 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 DIAPH2-AS1Q14236 149 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 WFDC11Q8NEX6 87 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 OR5C1Q8NGR4 320 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 C1QTNF6Q9BXI9 259 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 PARP12Q9H0J9 701 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 LINC00597Q9H2U6 94 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 TMEM216Q9P0N5 145 aa4.71□□□□□ -1.66
TRAPPC11-209ENST00000512476 MYLKQ15746 1914 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 TRAV8-1A0A0A6YYK1 113 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 TMEM269A0A1B0GVZ9 245 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 C9JQL5 133 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 C1QL1O75973 258 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 DPM2O94777 84 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 PMP2P02689 132 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 CRYBB3P26998 211 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 C10orf25Q5T742 122 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 AMMECR1LQ6DCA0 310 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 OR5A2Q8NGI9 324 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 RNASE6Q93091 150 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 MED28Q9H204 178 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 CXorf51AA0A1B0GTR3 108 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 FAM220BPB1ANY3 271 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 K7EPK0 472 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 LGALS9O00182 355 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 LINC01565O15544 149 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 ZNF780AO75290 641 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 TRGC2P03986 189 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 UBE2NP61088 152 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 ZNF146Q15072 292 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 VMA21Q3ZAQ7 101 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 FBXL19-AS1Q494R0 122 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 LY6G5CQ5SRR4 150 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 TIFABQ6ZNK6 161 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 STAG3L4Q8TBR4 150 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 RBPMSQ93062 196 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 LINC00052Q96N35 136 aa4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 RBM38Q9H0Z9 239 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-209ENST00000512476 J3QR89 54 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 LYZL6O75951 148 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 IGHV3-43DP0DP04 118 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 GABARAPL2P60520 117 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 SRPXP78539 464 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 KIAA1644Q3SXP7 199 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 TCEAL5Q5H9L2 206 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 FAM78AQ5JUQ0 283 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 UBE2NLQ5JXB2 153 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 CEMP1Q6PRD7 247 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 ZNF575Q86XF7 245 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 FGF13Q92913 245 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 COMMD3Q9UBI1 195 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 MCTS1Q9ULC4 181 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 PROCRQ9UNN8 238 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 CHD3Q12873 2000 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 PNMA8CA0A1B0GUJ8 204 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 GGT3PA6NGU5 568 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 GGTLC3B5MD39 225 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 UPK2O00526 184 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 OR2T1O43869 369 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 PIRTP0C851 137 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 PDGFRLQ15198 375 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 Q5BKY6 102 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 SUMO4Q6EEV6 95 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 OR5D14Q8NGL3 314 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 TMEM70Q9BUB7 260 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 SND1-IT1Q9HBX3 110 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 CTSZQ9UBR2 303 aa4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 MARCOQ9UEW3 520 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-209ENST00000512476 KRBOX1C9JBD0 128 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 SNRNP200O75643 2136 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 APOMO95445 188 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 PPIBP23284 216 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 C22orf39Q6P5X5 142 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 NKAPP1Q8N9T2 125 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 TCEAL2Q9H3H9 227 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 V9GYS6 101 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 COL4A3Q01955 1670 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 TRBV19A0A075B6N1 114 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 CCL22O00626 93 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 COX7A2LO14548 114 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 CD5LO43866 347 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 NAPSAO96009 420 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 CISD3P0C7P0 127 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 FHL1Q13642 323 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 HES1Q14469 280 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms