RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 CCKARP32238 428 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 RELBQ01201 579 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 Q8TCH9 128 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 SFRP2Q96HF1 295 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 VAMP8Q9BV40 100 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 ALPK3Q96L96 1907 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 DLX6P56179 175 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 ICAM4Q14773 271 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 ZNF343Q6P1L6 599 aa10.76□□□□□ -0.69
PCDHA4-202ENST00000512229 PRSS8Q16651 343 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 GCSAMLQ5JQS6 135 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 VSIRQ9H7M9 311 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 PRRC2CQ9Y520 2896 aaKnown RBP10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 IGHV1-3A0A0C4DH29 117 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 IGHV3-23P01764 117 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 RPP25LQ8N5L8 163 aaKnown RBP10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 TMEM167AQ8TBQ9 72 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 DYNLRB2Q8TF09 96 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 CGB1A6NKQ9 187 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 GPR183P32249 361 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 TFPI2P48307 235 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 PSG9Q00887 426 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 TMEM177Q53S58 311 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 GGTLC1Q9BX51 225 aa10.75□□□□□ -0.69
PCDHA4-202ENST00000512229 SCO2A0A1W2PP80 73 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 TMEM189A5PLL7 270 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 H0YJW9 148 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 WNT2P09544 360 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 EFNB3Q15768 340 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 SDF2L1Q9HCN8 221 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 FOXI3A8MTJ6 420 aaPredicted RBP10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 C2orf83Q53S99 150 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 NCOR1P1Q9H4R4 102 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 IGKV1-16P04430 117 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 ZNF738Q8NE65 137 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 OR10J6PQ8NGY7 276 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 YTHDF2Q9Y5A9 579 aaKnown RBP10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 RFNGQ9Y644 331 aa10.74□□□□□ -0.69
PCDHA4-202ENST00000512229 TCRBV4S1A1TA0A5B7 111 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 M0R2Z0 102 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 HLA-DQA1P01909 254 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 CD5P06127 495 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 KRTAP27-1Q3LI81 207 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 TM4SF20Q53R12 229 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 FAM53AQ6NSI3 398 aaPredicted RBP10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 AMY1AP04745 511 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 SMIM6P0DI80 62 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 HTN1P15515 57 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 TMEM155Q4W5P6 130 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 IGHV3OR16-8A0A075B7F1 116 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 OR2T8A6NH00 312 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 SH2D7A6NKC9 451 aaPredicted RBP10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 CENPVQ7Z7K6 275 aaPredicted RBP10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 RNF5Q99942 180 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 FGF23Q9GZV9 251 aaPredicted RBP10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 IGHV3-49A0A0A0MS15 119 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 A0A0G2JLM5 398 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 KLRD1Q13241 179 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 TPTE2P1Q5T6R2 138 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 SPANXN1Q5VSR9 72 aa10.73□□□□□ -0.69
PCDHA4-202ENST00000512229 CEP192Q8TEP8 1941 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 TRAV1-1A0A0B4J248 108 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 TMEM8BA6NDV4 472 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 OOSP1A8MZH6 123 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 BUB1B-PAK6H3BSN5 160 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 SIAH2O43255 324 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 VMO1Q7Z5L0 202 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 OR1P1Q8NH06 330 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 DMRTA2Q96SC8 542 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 C15orf62A8K5M9 175 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 WISP2O76076 250 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 MYOD1P15172 320 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 DUX4L9Q6RFH8 374 aaPredicted RBP10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 TRAV40A0A0B4J280 105 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 M0R1W7 72 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 PEX7O00628 323 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 OR5AL1P0C617 328 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.72□□□□□ -0.69
PCDHA4-202ENST00000512229 TMEM50AO95807 157 aa10.71□□□□□ -0.69
PCDHA4-202ENST00000512229 MINOS1Q5TGZ0 78 aa10.71□□□□□ -0.69
PCDHA4-202ENST00000512229 ZNRD1Q9P1U0 126 aa10.71□□□□□ -0.69
PCDHA4-202ENST00000512229 MINOS1-NBL1R4GNA1 71 aa10.71□□□□□ -0.69
PCDHA4-202ENST00000512229 XIRP2A4UGR9 3374 aa10.71□□□□□ -0.69
PCDHA4-202ENST00000512229 PRTN3P24158 256 aa10.71□□□□□ -0.69
PCDHA4-202ENST00000512229 C11orf53Q8IXP5 236 aa10.71□□□□□ -0.69
PCDHA4-202ENST00000512229 BPESC1Q9GZL8 116 aa10.71□□□□□ -0.69
PCDHA4-202ENST00000512229 A0A087WWC5 75 aa10.71□□□□□ -0.7
PCDHA4-202ENST00000512229 RPL23P62829 140 aaKnown RBP10.71□□□□□ -0.7
PCDHA4-202ENST00000512229 CLEC19AQ6UXS0 136 aa10.71□□□□□ -0.7
PCDHA4-202ENST00000512229 A0A1W2PRE2 83 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 ZNF98A6NK75 572 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 ZNF207O43670 478 aaKnown RBP10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 SAPCD1Q5SSQ6 148 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 EBLN2Q6P2I7 272 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 REG4Q9BYZ8 158 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 MRPL18Q9H0U6 180 aaKnown RBP10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 PRO1933Q9H354 126 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms