RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 RETNQ9HD89 108 aa6.44□□□□□ -1.38
PDPN-209ENST00000510906 GAR1Q9NY12 217 aaKnown RBP6.44□□□□□ -1.38
PDPN-209ENST00000510906 C21orf62Q9NYP8 219 aa6.44□□□□□ -1.38
PDPN-209ENST00000510906 TENM2Q9NT68 2774 aa6.44□□□□□ -1.38
PDPN-209ENST00000510906 IGHV3OR16-8A0A075B7F1 116 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 RBMY1BA6NDE4 496 aaKnown RBP6.43□□□□□ -1.38
PDPN-209ENST00000510906 RBMY1EA6NEQ0 496 aaKnown RBP6.43□□□□□ -1.38
PDPN-209ENST00000510906 OR11H12B2RN74 326 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 GABARAPH6UMI1 98 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 NPSP0C0P6 89 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 RBMY1DP0C7P1 496 aaKnown RBP6.43□□□□□ -1.38
PDPN-209ENST00000510906 C8orf88P0DMB2 117 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 TAS2R19P59542 299 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 HSPE1P61604 102 aaKnown RBP6.43□□□□□ -1.38
PDPN-209ENST00000510906 PRCDQ00LT1 54 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 SP6Q3SY56 376 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 SCGB2B2Q4G0G5 96 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 Q56UQ5 140 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 STEAP1BQ6NZ63 245 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 OR13C8Q8NGS7 320 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 OR1P1Q8NH06 330 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 TERB2Q8NHR7 220 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 MARCH1Q8TCQ1 289 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 DYNC2LI1Q8TCX1 351 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 C15orf40Q8WUR7 153 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 MARC2Q969Z3 335 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 BSCL2Q96G97 398 aaPredicted RBP6.43□□□□□ -1.38
PDPN-209ENST00000510906 ZNF486Q96H40 463 aaPredicted RBP6.43□□□□□ -1.38
PDPN-209ENST00000510906 ZNF414Q96IQ9 312 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 SRD5A3Q9H8P0 318 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 EDA2RQ9HAV5 297 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 PALMDQ9NP74 551 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 CCDC59Q9P031 241 aaKnown RBP6.43□□□□□ -1.38
PDPN-209ENST00000510906 MRPL27Q9P0M9 148 aaKnown RBP6.43□□□□□ -1.38
PDPN-209ENST00000510906 UFC1Q9Y3C8 167 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 CEPT1Q9Y6K0 416 aa6.43□□□□□ -1.38
PDPN-209ENST00000510906 DNAH7Q8WXX0 4024 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 A0A0B4J293 547 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 A0A0G2JRQ6 117 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 C3orf85A0A1B0GTC6 90 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 I3L2K1 104 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 ZNF207O43670 478 aaKnown RBP6.42□□□□□ -1.38
PDPN-209ENST00000510906 IGHV3-48P01763 117 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 CTSGP08311 255 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 P0C879 139 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 AKR1C2P52895 323 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 TMBIM6P55061 237 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 ELLP55199 621 aaPredicted RBP6.42□□□□□ -1.38
PDPN-209ENST00000510906 MRPS10P82664 201 aaKnown RBP6.42□□□□□ -1.38
PDPN-209ENST00000510906 TRIM16LQ309B1 348 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 CASC10Q5T4H9 136 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 ZFAND6Q6FIF0 208 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 SPSB3Q6PJ21 355 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 SLC16A13Q7RTY0 426 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 ZNF114Q8NC26 417 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 OR52B4Q8NGK2 314 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 OR1L6Q8NGR2 347 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 ZFAND1Q8TCF1 268 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 RAB2BQ8WUD1 216 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 SMIM4Q8WVI0 70 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 DIRAS2Q96HU8 199 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 FAM110AQ9BQ89 295 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 C20orf24Q9BUV8 137 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 HIPK2Q9H2X6 1198 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 COPZ2Q9P299 210 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 HERC1Q15751 4861 aa6.42□□□□□ -1.38
PDPN-209ENST00000510906 TRAV25A0A0B4J276 109 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 H3BMQ9 156 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 ZNF701M0R085 212 aaPredicted RBP6.41□□□□□ -1.38
PDPN-209ENST00000510906 NDUFA4O00483 81 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 CTDSPLO15194 276 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 ST8SIA3O43173 380 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 MT-CO2P00403 227 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 CTSDP07339 412 aaPredicted RBP6.41□□□□□ -1.38
PDPN-209ENST00000510906 LYL1P12980 280 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 UCP1P25874 307 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 SSBP1Q04837 148 aaKnown RBP6.41□□□□□ -1.38
PDPN-209ENST00000510906 FOXI1Q12951 378 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 IL18Q14116 193 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 MEF2DQ14814 521 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 RBPMS2Q6ZRY4 209 aaKnown RBP6.41□□□□□ -1.38
PDPN-209ENST00000510906 CCDC71LQ8N9Z2 235 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 OR4C16Q8NGL9 310 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 PINX1Q96BK5 328 aaKnown RBP6.41□□□□□ -1.38
PDPN-209ENST00000510906 ISOC1Q96CN7 298 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 ATP6V0BQ99437 205 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 BCL7BQ9BQE9 202 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 C6orf62Q9GZU0 229 aaPredicted RBP6.41□□□□□ -1.38
PDPN-209ENST00000510906 C5orf66Q9H5L9 145 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 DAZ1Q9NQZ3 744 aaKnown RBP6.41□□□□□ -1.38
PDPN-209ENST00000510906 PTTG2Q9NZH5 202 aa6.41□□□□□ -1.38
PDPN-209ENST00000510906 DISC1C4P0D8 188 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 NUPL2O15504 423 aaKnown RBP6.4□□□□□ -1.38
PDPN-209ENST00000510906 ATG12O94817 140 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 IFNA17P01571 189 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 OR5AC1P0C628 307 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 AKAIN1P0CW23 69 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 ETV6P41212 452 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 MFAP4P55083 255 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 ERHP84090 104 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms