RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 PRNDQ9UKY0 176 aa12.09□□□□□ -0.47
LMNA-222ENST00000508500 KCNIP3Q9Y2W7 256 aa12.09□□□□□ -0.47
LMNA-222ENST00000508500 UFC1Q9Y3C8 167 aa12.09□□□□□ -0.47
LMNA-222ENST00000508500 ALMS1Q8TCU4 4167 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 IGHV3OR16-8A0A075B7F1 116 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 TRAV25A0A0B4J276 109 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 C9orf170A2RU37 121 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 SSNA1O43805 119 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 CCNKO75909 580 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 SFT2D2O95562 160 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 CTSGP08311 255 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 SULT1A3P0DMM9 295 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 SULT1A4P0DMN0 295 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 IZUMO4Q1ZYL8 232 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 SLC16A13Q7RTY0 426 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 C12orf45Q8N5I9 185 aaPredicted RBP12.08□□□□□ -0.48
LMNA-222ENST00000508500 OR2C3Q8N628 320 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 MITD1Q8WV92 249 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 BSCL2Q96G97 398 aaPredicted RBP12.08□□□□□ -0.48
LMNA-222ENST00000508500 SEC22CQ9BRL7 303 aa12.08□□□□□ -0.48
LMNA-222ENST00000508500 CRYM-AS1A6NIL9 109 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 NDUFA4O00483 81 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 AKR1C4P17516 323 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 PI3P19957 117 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 OR1P1Q8NH06 330 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 COQ8AQ8NI60 647 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 TMEM230Q96A57 120 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 TMEM56Q96MV1 263 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 ATP6V0BQ99437 205 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 FKBP11Q9NYL4 201 aa12.07□□□□□ -0.48
LMNA-222ENST00000508500 I3L2K1 104 aa12.06□□□□□ -0.48
LMNA-222ENST00000508500 CYB5BO43169 146 aa12.06□□□□□ -0.48
LMNA-222ENST00000508500 ZNF207O43670 478 aaKnown RBP12.06□□□□□ -0.48
LMNA-222ENST00000508500 PIGPP57054 158 aa12.06□□□□□ -0.48
LMNA-222ENST00000508500 SPSB3Q6PJ21 355 aa12.06□□□□□ -0.48
LMNA-222ENST00000508500 RBPMS2Q6ZRY4 209 aaKnown RBP12.06□□□□□ -0.48
LMNA-222ENST00000508500 UBAC2Q8NBM4 344 aa12.06□□□□□ -0.48
LMNA-222ENST00000508500 OR1L6Q8NGR2 347 aa12.06□□□□□ -0.48
LMNA-222ENST00000508500 OVOL2Q9BRP0 275 aa12.06□□□□□ -0.48
LMNA-222ENST00000508500 NAA60Q9H7X0 242 aa12.06□□□□□ -0.48
LMNA-222ENST00000508500 DAZ1Q9NQZ3 744 aaKnown RBP12.06□□□□□ -0.48
LMNA-222ENST00000508500 UBQLN2Q9UHD9 624 aa12.06□□□□□ -0.48
LMNA-222ENST00000508500 TEX13DA0A0J9YY54 714 aaPredicted RBP12.05□□□□□ -0.48
LMNA-222ENST00000508500 TSPAN4O14817 238 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 IGKV1-5P01602 117 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 IGHV3-48P01763 117 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 P0C879 139 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
LMNA-222ENST00000508500 SRPXP78539 464 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 PRCDQ00LT1 54 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 ANKRD55Q3KP44 614 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 ODF3L2Q3SX64 289 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 Q56UQ5 140 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 H2BFWTQ7Z2G1 175 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 TCTE3Q8IZS6 198 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 LRTM2Q8N967 370 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 ZNF114Q8NC26 417 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 TP53RKQ96S44 253 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 SPAG8Q99932 426 aaPredicted RBP12.05□□□□□ -0.48
LMNA-222ENST00000508500 C20orf24Q9BUV8 137 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 GGTLC1Q9BX51 225 aa12.05□□□□□ -0.48
LMNA-222ENST00000508500 LOC102724200A0A096LPH7 203 aaPredicted RBP12.04□□□□□ -0.48
LMNA-222ENST00000508500 K7EMT4 169 aa12.04□□□□□ -0.48
LMNA-222ENST00000508500 VAMP1P23763 118 aa12.04□□□□□ -0.48
LMNA-222ENST00000508500 FCGR2BP31994 310 aaPredicted RBP12.04□□□□□ -0.48
LMNA-222ENST00000508500 SUPT4H1P63272 117 aaKnown RBP12.04□□□□□ -0.48
LMNA-222ENST00000508500 FCN2Q15485 313 aa12.04□□□□□ -0.48
LMNA-222ENST00000508500 SPINK9Q5DT21 86 aa12.04□□□□□ -0.48
LMNA-222ENST00000508500 OR4A16Q8NH70 328 aa12.04□□□□□ -0.48
LMNA-222ENST00000508500 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
LMNA-222ENST00000508500 AGRNO00468 2067 aa12.04□□□□□ -0.48
LMNA-222ENST00000508500 DUXBA0A1W2PPF3 345 aa12.03□□□□□ -0.48
LMNA-222ENST00000508500 MT-CO2P00403 227 aa12.03□□□□□ -0.48
LMNA-222ENST00000508500 OR11H7Q8NGC8 314 aa12.03□□□□□ -0.48
LMNA-222ENST00000508500 MISP3Q96FF7 219 aa12.03□□□□□ -0.48
LMNA-222ENST00000508500 A0A0G2JRQ6 117 aa12.02□□□□□ -0.49
LMNA-222ENST00000508500 C15orf62A8K5M9 175 aa12.02□□□□□ -0.49
LMNA-222ENST00000508500 GIPP09681 153 aaPredicted RBP12.02□□□□□ -0.49
LMNA-222ENST00000508500 RAP2BP61225 183 aa12.02□□□□□ -0.49
LMNA-222ENST00000508500 LGI3Q8N145 548 aa12.02□□□□□ -0.49
LMNA-222ENST00000508500 IL22RA2Q969J5 263 aa12.02□□□□□ -0.49
LMNA-222ENST00000508500 OR10C1Q96KK4 312 aa12.02□□□□□ -0.49
LMNA-222ENST00000508500 RNF2Q99496 336 aa12.02□□□□□ -0.49
LMNA-222ENST00000508500 MGAT4CQ9UBM8 478 aa12.02□□□□□ -0.49
LMNA-222ENST00000508500 SMPXQ9UHP9 88 aa12.02□□□□□ -0.49
LMNA-222ENST00000508500 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
LMNA-222ENST00000508500 IGHV7-4-1A0A0J9YVY3 117 aa12.01□□□□□ -0.49
LMNA-222ENST00000508500 C3orf85A0A1B0GTC6 90 aa12.01□□□□□ -0.49
LMNA-222ENST00000508500 CHEK1O14757 476 aa12.01□□□□□ -0.49
LMNA-222ENST00000508500 HNRNPCP07910 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
LMNA-222ENST00000508500 MFAP4P55083 255 aa12.01□□□□□ -0.49
LMNA-222ENST00000508500 CYCSP99999 105 aaKnown RBP12.01□□□□□ -0.49
LMNA-222ENST00000508500 EWSR1Q01844 656 aaKnown RBP eCLIP12.01□□□□□ -0.49
LMNA-222ENST00000508500 TMEM187Q14656 261 aa12.01□□□□□ -0.49
LMNA-222ENST00000508500 SP6Q3SY56 376 aa12.01□□□□□ -0.49
LMNA-222ENST00000508500 PVRIGQ6DKI7 326 aa12.01□□□□□ -0.49
LMNA-222ENST00000508500 ST8SIA3O43173 380 aa12□□□□□ -0.49
LMNA-222ENST00000508500 UCP1P25874 307 aa12□□□□□ -0.49
LMNA-222ENST00000508500 ZNF124Q15973 351 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms