RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 LYG2Q86SG7 212 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 OR4X1Q8NH49 305 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 RAB2BQ8WUD1 216 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 SMIM4Q8WVI0 70 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 RBPMSQ93062 196 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 TMEM222Q9H0R3 208 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 CSTL1Q9H114 145 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 KLK5Q9Y337 293 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 CXorf65A6NEN9 183 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 DNASE2O00115 360 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 AKAIN1P0CW23 69 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 NPPCP23582 126 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 OPRK1P41145 380 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 ETV6P41212 452 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 ALDH3B2P48448 385 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 EIF2B2P49770 351 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 MARCH1Q8TCQ1 289 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 GRAMD2BQ96HH9 432 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 METTL26Q96S19 204 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 NAA60Q9H7X0 242 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 KCNIP3Q9Y2W7 256 aa10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 PUS1Q9Y606 427 aaKnown RBP eCLIP10.67□□□□□ -0.7
HMGCS1-203ENST00000507004 A0A0J9YWU9 116 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 NOL3O60936 208 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 SLC25A4P12235 298 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 RPL35AP18077 110 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 TMBIM6P55061 237 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 IZUMO4Q1ZYL8 232 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 BSXQ3C1V8 233 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 SP6Q3SY56 376 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 TMEM41BQ5BJD5 291 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 ETFRF1Q6IPR1 90 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 RNASEH2CQ8TDP1 164 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 IL22RA2Q969J5 263 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 DIRAS2Q96HU8 199 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 MIXL1Q9H2W2 232 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 ZFAND3Q9H8U3 227 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 CCDC59Q9P031 241 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 RSL24D1Q9UHA3 163 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 SCP2D1Q9UJQ7 156 aa10.66□□□□□ -0.7
HMGCS1-203ENST00000507004 IGHV3-48P01763 117 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 OR5AC1P0C628 307 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 TFPI2P48307 235 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 IL18Q14116 193 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 SPINK9Q5DT21 86 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 OR4D10Q8NGI6 311 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 GLYATL2Q8WU03 294 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 TMEM230Q96A57 120 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 ZNF414Q96IQ9 312 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 MFFQ9GZY8 342 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 GPR132Q9UNW8 380 aa10.65□□□□□ -0.7
HMGCS1-203ENST00000507004 IGHV3-49A0A0A0MS15 119 aa10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 CRYM-AS1A6NIL9 109 aa10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 CTDSP2O14595 271 aa10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 AP2S1P53680 142 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 ATP5IP56385 69 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 RPL11P62913 178 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 C2orf83Q53S99 150 aa10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 CEMP1Q6PRD7 247 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 APRG1Q8IVJ8 170 aa10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 OR1S2Q8NGQ3 325 aa10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 Q8WTZ3 238 aa10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 ST8SIA2Q92186 375 aa10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 RTBDNQ9BSG5 229 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 MS4A6AQ9H2W1 248 aa10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 HEYLQ9NQ87 328 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 TMEM56-RWDD3S4R434 201 aa10.64□□□□□ -0.71
HMGCS1-203ENST00000507004 IGKV3-7A0A075B6H7 116 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 HELTA6NFD8 242 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 GSTZ1O43708 216 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 ANXA3P12429 323 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 CRYBB3P26998 211 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 SRPXP78539 464 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 TMEM268Q5VZI3 342 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 CLVS1Q8IUQ0 354 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 SELENOHQ8IZQ5 122 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 SLC24A4Q8NFF2 622 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 OR4C16Q8NGL9 310 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 RARRES2Q99969 163 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 CACNG5Q9UF02 275 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 CSMD3Q7Z407 3707 aa10.63□□□□□ -0.71
HMGCS1-203ENST00000507004 DNAH1Q9P2D7 4330 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 IGHV3OR16-13A0A075B7E8 117 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 IGHV3-74A0A0B4J1X5 117 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 A0A0G2JRQ6 117 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 A0A1B0GU03 582 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 CEBPZOSA8MTT3 80 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 SULT1A3P0DMM9 295 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 SULT1A4P0DMN0 295 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 FAUP35544 74 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 YPEL3P61236 119 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 PMS2P11Q13670 270 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 SPCS2Q15005 226 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 MORN3Q6PF18 240 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 STHQ8IWL8 128 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 GBGT1Q8N5D6 347 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 DYNC2LI1Q8TCX1 351 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 LINC00476Q8WZB0 136 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 C11orf68Q9H3H3 251 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms