RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TTC21AQ8NDW8 1320 aa0.9□□□□□ -2.26
TOPBP1-204ENST00000505804 A0A0C4DFX4 3053 aa0.9□□□□□ -2.26
TOPBP1-204ENST00000505804 SCN10AQ9Y5Y9 1956 aa0.9□□□□□ -2.26
TOPBP1-204ENST00000505804 ANAPC1Q9H1A4 1944 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 MYH2Q9UKX2 1941 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 DOCK3Q8IZD9 2030 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 TRBV20OR9-2A0A075B6H5 130 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 hADV38S2A0JD32 116 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 OR4C46A6NHA9 309 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 FABP5P3A8MUU1 101 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 FAAHO00519 579 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 SULT1B1O43704 296 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 OR5F1O95221 314 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 HLA-DRB1P01911 266 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 PRM2P04554 102 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 RNASE3P12724 160 aaKnown RBP0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 CYBAP13498 195 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 ZNF80P51504 273 aaPredicted RBP0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 RPS20P60866 119 aaKnown RBP0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 TAF1AQ15573 450 aaPredicted RBP0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 KISS1Q15726 138 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 GRK1Q15835 563 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 KCNJ8Q15842 424 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 PXT1Q8NFP0 134 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 OR52L1Q8NGH7 329 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 OR10X1Q8NGY0 326 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 MRPL30Q8TCC3 161 aaKnown RBP0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 BTF3L4Q96K17 158 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 TSPAN32Q96QS1 320 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 C9orf16Q9BUW7 83 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 ULBP3Q9BZM4 244 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 COMMD5Q9GZQ3 224 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 WDR61Q9GZS3 305 aaKnown RBP0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 STOML2Q9UJZ1 356 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 NEO1Q92859 1461 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 PBRM1Q86U86 1689 aa0.9□□□□□ -2.27
TOPBP1-204ENST00000505804 MYH3P11055 1940 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 MED12LQ86YW9 2145 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 DIDO1Q9BTC0 2240 aaKnown RBP0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 NUP210LQ5VU65 1888 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 RTL1A6NKG5 1358 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 FAM159BA6NKW6 160 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 PDE6DO43924 150 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 OR2B3O76000 313 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 OR7C1O76099 320 aaPredicted RBP0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 CRYZL1O95825 349 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 SERPINB9P50453 376 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 DEFA1P59665 94 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 ZNF846Q147U1 533 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 IAH1Q2TAA2 248 aaPredicted RBP0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 IBA57Q5T440 356 aaKnown RBP0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 AADACL3Q5VUY0 350 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 HACD4Q5VWC8 232 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 DHRS4L2Q6PKH6 230 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 OOSP2Q86WS3 158 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 ANKRD29Q8N6D5 301 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 GDPD1Q8N9F7 314 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 OR51A2Q8NGJ7 313 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 C11orf40Q8WZ69 217 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 CEP19Q96LK0 163 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 SERPINI1Q99574 410 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 SIGMAR1Q99720 223 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 KIFC1Q9BW19 673 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 NMNAT1Q9HAN9 279 aaPredicted RBP0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 C14orf105Q9NVL8 296 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 ARMC1Q9NVT9 282 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 FBXL12Q9NXK8 326 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 C22orf24Q9Y442 160 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 TMEM56-RWDD3S4R434 201 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 DENND4CQ5VZ89 1909 aa0.89□□□□□ -2.27
TOPBP1-204ENST00000505804 COL4A5P29400 1685 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 KIAA1109Q2LD37 5005 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 TRAV14DV4A0A0A6YYC5 116 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 EXOC1LA0A1B0GW35 172 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 DPRXA6NFQ7 191 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 E5RI56 91 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 PIRO00625 290 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 IGKV1-5P01602 117 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 HIST1H2BOP23527 126 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 HIST1H2BBP33778 126 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 HIST1H2BDP58876 126 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 HIST1H2BCP62807 126 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 CCL20P78556 96 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 HIST2H2BEQ16778 126 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 C12orf74Q32Q52 190 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 TEX36Q5VZQ5 186 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 AAED1Q7RTV5 226 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 WFDC11Q8NEX6 87 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 MCFD2Q8NI22 146 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 CT55Q8WUE5 264 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 AP3S1Q92572 193 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 HIST1H2BHQ93079 126 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 PHB2Q99623 299 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 HIST1H2BNQ99877 126 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 HIST1H2BMQ99879 126 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 NIPSNAP1Q9BPW8 284 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 DERL1Q9BUN8 251 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 C11orf68Q9H3H3 251 aaKnown RBP0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms