RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	MEF2D	Q14814	521 aa		12.07	□□□□□ -0.48
DDR1-256	ENST00000505066	ST8SIA2	Q92186	375 aa		12.07	□□□□□ -0.48
DDR1-256	ENST00000505066	C11orf68	Q9H3H3	251 aa	Known RBP	12.07	□□□□□ -0.48
DDR1-256	ENST00000505066	HEYL	Q9NQ87	328 aa	Predicted RBP	12.07	□□□□□ -0.48
DDR1-256	ENST00000505066	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	12.07	□□□□□ -0.48
DDR1-256	ENST00000505066	KLK11	Q9UBX7	282 aa		12.07	□□□□□ -0.48
DDR1-256	ENST00000505066	IGHV3-66	A0A0C4DH42	116 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	HELT	A6NFD8	242 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	DISC1	C4P0D8	188 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	CLN5	O75503	358 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	IGKV1-39	P01597	117 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	IGKV1D-39	P04432	117 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	HTR2B	P41595	481 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	RPL5	P46777	297 aa	Known RBP	12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	SPCS3	P61009	180 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	ETFRF1	Q6IPR1	90 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	MORN3	Q6PF18	240 aa	Predicted RBP	12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	C2CD4C	Q8TF44	421 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066		Q8WTZ3	238 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	VSIR	Q9H7M9	311 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066	MTFP1	Q9UDX5	166 aa		12.06	□□□□□ -0.48
DDR1-256	ENST00000505066		A0A0B4J293	547 aa		12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	NUTF2	P61970	127 aa	Known RBP	12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	DHODH	Q02127	395 aa		12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	SSBP1	Q04837	148 aa	Known RBP	12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	IZUMO4	Q1ZYL8	232 aa		12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	FAM90A2P	Q658T7	463 aa		12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	LEMD1	Q68G75	181 aa		12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	LGALS9C	Q6DKI2	356 aa		12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	TMEM229B	Q8NBD8	167 aa		12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	OR4X1	Q8NH49	305 aa		12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	OR52I2	Q8NH67	350 aa		12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	TP53RK	Q96S44	253 aa		12.05	□□□□□ -0.48
DDR1-256	ENST00000505066	PIGBOS1	A0A0B4J2F0	54 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	CEBPZOS	A8MTT3	80 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	C11orf94	C9JXX5	98 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	IGKV1-5	P01602	117 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	SPP1	P10451	314 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	SLC25A4	P12235	298 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	SP6	Q3SY56	376 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	STEAP1B	Q6NZ63	245 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	SCGB3A2	Q96PL1	93 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	RABL2B	Q9UNT1	228 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	KCNIP3	Q9Y2W7	256 aa		12.04	□□□□□ -0.48
DDR1-256	ENST00000505066	GSTZ1	O43708	216 aa	Predicted RBP	12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	RNASE2	P10153	161 aa	Known RBP	12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	NUP62	P37198	522 aa	Predicted RBP	12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	P2RY1	P47900	373 aa		12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	NANOS2	P60321	138 aa	Known RBP	12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	SNRPD3	P62318	126 aa	Known RBP	12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	ZNF124	Q15973	351 aa		12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	OR1S2	Q8NGQ3	325 aa		12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	OR13C8	Q8NGS7	320 aa		12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	ZNF414	Q96IQ9	312 aa		12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	ABHD1	Q96SE0	405 aa		12.03	□□□□□ -0.48
DDR1-256	ENST00000505066	GABARAP	H6UMI1	98 aa		12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	GABARAP	O95166	117 aa		12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	UCP1	P25874	307 aa		12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	DHRS2	Q13268	280 aa		12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	SURF2	Q15527	256 aa	Predicted RBP	12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	LHFPL1	Q86WI0	220 aa		12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	OR52E5	Q8NH55	327 aa		12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	MARCH1	Q8TCQ1	289 aa		12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	RBPMS	Q93062	196 aa	Known RBP	12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	C1QTNF4	Q9BXJ3	329 aa		12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	TMEM222	Q9H0R3	208 aa		12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	STARD9	Q9P2P6	4700 aa		12.02	□□□□□ -0.49
DDR1-256	ENST00000505066	ZNF688	P0C7X2	276 aa		12.01	□□□□□ -0.49
DDR1-256	ENST00000505066	MIF	P14174	115 aa		12.01	□□□□□ -0.49
DDR1-256	ENST00000505066	CRYBB3	P26998	211 aa		12.01	□□□□□ -0.49
DDR1-256	ENST00000505066	PRRT1	Q99946	306 aa		12.01	□□□□□ -0.49
DDR1-256	ENST00000505066	ZFAND3	Q9H8U3	227 aa		12.01	□□□□□ -0.49
DDR1-256	ENST00000505066		A0A1B0GU03	582 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	NOL3	O60936	208 aa	Known RBP	12	□□□□□ -0.49
DDR1-256	ENST00000505066	APOH	P02749	345 aa	Predicted RBP	12	□□□□□ -0.49
DDR1-256	ENST00000505066	CD74	P04233	296 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	FABP1	P07148	127 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	HNRNPC	P07910	306 aa	Known RBP eCLIP	12	□□□□□ -0.49
DDR1-256	ENST00000505066	OR5AC1	P0C628	307 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	OR10J1	P30954	320 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	TIGIT	Q495A1	244 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	ACTL10	Q5JWF8	245 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	GPR107	Q5VW38	600 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	GPR141	Q7Z602	305 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	SLC24A4	Q8NFF2	622 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	NAA60	Q9H7X0	242 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	CACNG5	Q9UF02	275 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	SCP2D1	Q9UJQ7	156 aa		12	□□□□□ -0.49
DDR1-256	ENST00000505066	CSMD3	Q7Z407	3707 aa		11.99	□□□□□ -0.49
DDR1-256	ENST00000505066	IGLL5	B9A064	214 aa		11.99	□□□□□ -0.49
DDR1-256	ENST00000505066	DEFB4A	O15263	64 aa		11.99	□□□□□ -0.49
DDR1-256	ENST00000505066	CDS2	O95674	445 aa		11.99	□□□□□ -0.49
DDR1-256	ENST00000505066	IFNA10	P01566	189 aa		11.99	□□□□□ -0.49
DDR1-256	ENST00000505066	AKAIN1	P0CW23	69 aa		11.99	□□□□□ -0.49
DDR1-256	ENST00000505066	ANXA3	P12429	323 aa		11.99	□□□□□ -0.49
DDR1-256	ENST00000505066	RND2	P52198	227 aa		11.99	□□□□□ -0.49
DDR1-256	ENST00000505066	IL18	Q14116	193 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms