RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 Q56UQ5 140 aa12.83□□□□□ -0.36
SYNE4-207ENST00000505054 BSCL2Q96G97 398 aaPredicted RBP12.83□□□□□ -0.36
SYNE4-207ENST00000505054 ZNF414Q96IQ9 312 aa12.83□□□□□ -0.36
SYNE4-207ENST00000505054 MRPL36Q9P0J6 103 aaKnown RBP12.83□□□□□ -0.36
SYNE4-207ENST00000505054 IGHV3-35A0A0C4DH35 117 aa12.82□□□□□ -0.36
SYNE4-207ENST00000505054 SYNGR2O43760 224 aa12.82□□□□□ -0.36
SYNE4-207ENST00000505054 MFAP4P55083 255 aa12.82□□□□□ -0.36
SYNE4-207ENST00000505054 ID3Q02535 119 aa12.82□□□□□ -0.36
SYNE4-207ENST00000505054 MLANAQ16655 118 aa12.82□□□□□ -0.36
SYNE4-207ENST00000505054 GPHB5Q86YW7 130 aa12.82□□□□□ -0.36
SYNE4-207ENST00000505054 ZBTB8BQ8NAP8 495 aaPredicted RBP12.82□□□□□ -0.36
SYNE4-207ENST00000505054 UXS1Q8NBZ7 420 aa12.82□□□□□ -0.36
SYNE4-207ENST00000505054 U3KQ87 197 aa12.82□□□□□ -0.36
SYNE4-207ENST00000505054 C3orf84H3BNL1 204 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 MED6O75586 246 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 IFNA10P01566 189 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 CSN3P07498 182 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 CTSGP08311 255 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 OPRK1P41145 380 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 INSL3P51460 131 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 TATDN3Q17R31 274 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 SPSB3Q6PJ21 355 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 UNQ9165/PRO28630Q6UXU0 137 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 RNASEH2CQ8TDP1 164 aaKnown RBP12.81□□□□□ -0.36
SYNE4-207ENST00000505054 TXN2Q99757 166 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 ELOVL1Q9BW60 279 aa12.81□□□□□ -0.36
SYNE4-207ENST00000505054 STAB2Q8WWQ8 2551 aa12.8□□□□□ -0.36
SYNE4-207ENST00000505054 C15orf62A8K5M9 175 aa12.8□□□□□ -0.36
SYNE4-207ENST00000505054 LGALS9O00182 355 aa12.8□□□□□ -0.36
SYNE4-207ENST00000505054 WRBO00258 174 aa12.8□□□□□ -0.36
SYNE4-207ENST00000505054 PRAF2O60831 178 aa12.8□□□□□ -0.36
SYNE4-207ENST00000505054 EDN2P20800 178 aa12.8□□□□□ -0.36
SYNE4-207ENST00000505054 NKX2-1P43699 371 aaPredicted RBP12.8□□□□□ -0.36
SYNE4-207ENST00000505054 POLR2GP62487 172 aaKnown RBP eCLIP12.8□□□□□ -0.36
SYNE4-207ENST00000505054 ADAMTSL5Q6ZMM2 481 aa12.8□□□□□ -0.36
SYNE4-207ENST00000505054 HAPLN4Q86UW8 402 aa12.8□□□□□ -0.36
SYNE4-207ENST00000505054 OR4C12Q96R67 309 aa12.8□□□□□ -0.36
SYNE4-207ENST00000505054 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
SYNE4-207ENST00000505054 GPN1Q9HCN4 374 aaPredicted RBP12.8□□□□□ -0.36
SYNE4-207ENST00000505054 PALMDQ9NP74 551 aa12.8□□□□□ -0.36
SYNE4-207ENST00000505054 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
SYNE4-207ENST00000505054 LSM4Q9Y4Z0 139 aaKnown RBP12.8□□□□□ -0.36
SYNE4-207ENST00000505054 SNRPGP15A8MWD9 76 aa12.79□□□□□ -0.36
SYNE4-207ENST00000505054 A8MWP6 167 aa12.79□□□□□ -0.36
SYNE4-207ENST00000505054 PTTG1O95997 202 aa12.79□□□□□ -0.36
SYNE4-207ENST00000505054 NPBWR1P48145 328 aa12.79□□□□□ -0.36
SYNE4-207ENST00000505054 FAM106AQ4KMX7 169 aa12.79□□□□□ -0.36
SYNE4-207ENST00000505054 NOXA1Q86UR1 476 aa12.79□□□□□ -0.36
SYNE4-207ENST00000505054 CIB3Q96Q77 187 aaPredicted RBP12.79□□□□□ -0.36
SYNE4-207ENST00000505054 GSKIPQ9P0R6 139 aa12.79□□□□□ -0.36
SYNE4-207ENST00000505054 PEMTQ9UBM1 199 aa12.79□□□□□ -0.36
SYNE4-207ENST00000505054 RPS10-NUDT3A0A1W2PQS6 291 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 ZNF320A2RRD8 509 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 TMEM213A2RRL7 107 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 FAM25EA8MYX2 175 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 NUPL2O15504 423 aaKnown RBP12.78□□□□□ -0.36
SYNE4-207ENST00000505054 GNG7O60262 68 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 TMEM50AO95807 157 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 SCGB1D2O95969 90 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 ATP5IP56385 69 aaPredicted RBP12.78□□□□□ -0.36
SYNE4-207ENST00000505054 PRSS54Q6PEW0 395 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 OR4X1Q8NH49 305 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 TMEM190Q8WZ59 177 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 PRR25Q96S07 402 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 SIGLEC8Q9NYZ4 499 aa12.78□□□□□ -0.36
SYNE4-207ENST00000505054 RCL1Q9Y2P8 373 aaKnown RBP12.78□□□□□ -0.36
SYNE4-207ENST00000505054 C5orf51A6NDU8 294 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 C2orf70A6NJV1 201 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 H3BP45 60 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 NDUFA4O00483 81 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 SSSCA1O60232 199 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 CLN5O75503 358 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 IGLV1-51P01701 117 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 MBPP02686 304 aaPredicted RBP12.77□□□□□ -0.37
SYNE4-207ENST00000505054 IFNA4P05014 189 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 RND2P52198 227 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 SLC16A13Q7RTY0 426 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 CACNG8Q8WXS5 425 aa12.77□□□□□ -0.37
SYNE4-207ENST00000505054 SLC25A4P12235 298 aa12.76□□□□□ -0.37
SYNE4-207ENST00000505054 PAX9P55771 341 aa12.76□□□□□ -0.37
SYNE4-207ENST00000505054 TM4SF20Q53R12 229 aa12.76□□□□□ -0.37
SYNE4-207ENST00000505054 TMEM116Q8NCL8 245 aa12.76□□□□□ -0.37
SYNE4-207ENST00000505054 C2orf50Q96LR7 162 aa12.76□□□□□ -0.37
SYNE4-207ENST00000505054 RYR2Q92736 4967 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 IGHV3OR16-8A0A075B7F1 116 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 C7orf66A4D0T2 115 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 PRSS46E5RG02 174 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 LY86O95711 162 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 IGKV1-17P01599 117 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 FOLR2P14207 255 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 RELQ04864 619 aaPredicted RBP12.75□□□□□ -0.37
SYNE4-207ENST00000505054 IL15RAQ13261 267 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 SPANXN5Q5MJ07 72 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 ETFRF1Q6IPR1 90 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 GSG1LQ6UXU4 331 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 PAIP2BQ9ULR5 123 aaKnown RBP12.75□□□□□ -0.37
SYNE4-207ENST00000505054 UFC1Q9Y3C8 167 aa12.75□□□□□ -0.37
SYNE4-207ENST00000505054 DNAH7Q8WXX0 4024 aa12.74□□□□□ -0.37
SYNE4-207ENST00000505054 GOSR2O14653 212 aa12.74□□□□□ -0.37
SYNE4-207ENST00000505054 SIX6O95475 246 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms