RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 FKBP11Q9NYL4 201 aa10.45□□□□□ -0.74
PDLIM7-211ENST00000504318 C21orf62Q9NYP8 219 aa10.45□□□□□ -0.74
PDLIM7-211ENST00000504318 MRPL27Q9P0M9 148 aaKnown RBP10.45□□□□□ -0.74
PDLIM7-211ENST00000504318 MGAT4CQ9UBM8 478 aa10.45□□□□□ -0.74
PDLIM7-211ENST00000504318 GPR132Q9UNW8 380 aa10.45□□□□□ -0.74
PDLIM7-211ENST00000504318 A0A0G2JRQ6 117 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 OR11H12B2RN74 326 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 INS-IGF2F8WCM5 200 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 NDUFA4O00483 81 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 SNAPC5O75971 98 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 CTSDP07339 412 aaPredicted RBP10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 PIGPP57054 158 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 RAP2BP61225 183 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 SPSB3Q6PJ21 355 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 C12orf45Q8N5I9 185 aaPredicted RBP10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 MARC2Q969Z3 335 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 HINT2Q9BX68 163 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 C5orf66Q9H5L9 145 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 TUBA4BQ9H853 241 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 SRD5A3Q9H8P0 318 aa10.44□□□□□ -0.74
PDLIM7-211ENST00000504318 TRAV25A0A0B4J276 109 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 A0A0B4J2A0 478 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 C9orf170A2RU37 121 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 SCAF4O95104 1147 aaKnown RBP10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 AKR1C4P17516 323 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 UCP1P25874 307 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 HSPE1P61604 102 aaKnown RBP10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 DHODHQ02127 395 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 PPP1R1AQ13522 171 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 GUCA2BQ16661 112 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 AARDQ4LEZ3 155 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 H2BFWTQ7Z2G1 175 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 NOXA1Q86UR1 476 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 CCDC71LQ8N9Z2 235 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 OR52B4Q8NGK2 314 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 COQ8AQ8NI60 647 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 MITD1Q8WV92 249 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 HYLS1Q96M11 299 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 TMEM56Q96MV1 263 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 SHPKQ9UHJ6 478 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 UFC1Q9Y3C8 167 aa10.43□□□□□ -0.74
PDLIM7-211ENST00000504318 K7EMT4 169 aa10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 SFT2D2O95562 160 aa10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 CXCL3P19876 107 aa10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 VAMP1P23763 118 aa10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 Q6ZRM9 215 aa10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 OR1L6Q8NGR2 347 aa10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 LHFPL5Q8TAF8 219 aa10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 OR10C1Q96KK4 312 aa10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 FAM110AQ9BQ89 295 aa10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 RTBDNQ9BSG5 229 aaPredicted RBP10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 DAZ1Q9NQZ3 744 aaKnown RBP10.42□□□□□ -0.74
PDLIM7-211ENST00000504318 IGHV3OR16-8A0A075B7F1 116 aa10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 C3orf85A0A1B0GTC6 90 aa10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 GOSR2O14653 212 aa10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 TSPAN4O14817 238 aa10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 ST8SIA3O43173 380 aa10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 LYL1P12980 280 aa10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 S100GP29377 79 aa10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 ODF3L2Q3SX64 289 aa10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 SP6Q3SY56 376 aa10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 OR4A16Q8NH70 328 aa10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 GAR1Q9NY12 217 aaKnown RBP10.41□□□□□ -0.74
PDLIM7-211ENST00000504318 PIGBOS1A0A0B4J2F0 54 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 C15orf62A8K5M9 175 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 CYB5BO43169 146 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 MT-CO2P00403 227 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 BSXQ3C1V8 233 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 SPINK9Q5DT21 86 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 SLC16A13Q7RTY0 426 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 GLYATL2Q8WU03 294 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 TMEM230Q96A57 120 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 TXN2Q99757 166 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 SPAG8Q99932 426 aaPredicted RBP10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 KCNIP3Q9Y2W7 256 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 HYDINQ4G0P3 5121 aa10.4□□□□□ -0.74
PDLIM7-211ENST00000504318 TEX13DA0A0J9YY54 714 aaPredicted RBP10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 CRYM-AS1A6NIL9 109 aa10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 ZNF207O43670 478 aaKnown RBP10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 CDS2O95674 445 aa10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 IGHV3-48P01763 117 aa10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 RNASE2P10153 161 aaKnown RBP10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 SRPXP78539 464 aa10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 FAM90A2PQ658T7 463 aa10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 ZFAND6Q6FIF0 208 aa10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 OR2T35Q8NGX2 323 aa10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 TMEM222Q9H0R3 208 aa10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 FNDC4Q9H6D8 234 aaPredicted RBP10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 MRPL36Q9P0J6 103 aaKnown RBP10.39□□□□□ -0.75
PDLIM7-211ENST00000504318 CHEK1O14757 476 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 C4BPBP20851 252 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 MFAP4P55083 255 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 FGL1Q08830 312 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 Q56UQ5 140 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 UBAC2Q8NBM4 344 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 MISP3Q96FF7 219 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 RNF2Q99496 336 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 OVOL2Q9BRP0 275 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 NAA60Q9H7X0 242 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 ZFAND3Q9H8U3 227 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms