RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 NEUROG1Q92886 237 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 TNFRSF14Q92956 283 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 ST6GALNAC6Q969X2 333 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 PLSCR4Q9NRQ2 329 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 LINC00527Q9UJ94 153 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 EPDR1Q9UM22 224 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 A0A0A6YYD4 124 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 TBX6O95947 436 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 TMEM200BQ69YZ2 307 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 C20orf204Q6ZNR8 217 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 TMEM219Q86XT9 240 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 C10orf126Q8N4M7 172 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 NUDT10Q8NFP7 164 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 OR9G4Q8NGQ1 327 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 SCN8AQ9UQD0 1980 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 UNQ6494/PRO21346Q6UXR6 183 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 GGNQ86UU5 652 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 VCX2Q9H322 139 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 CHD5Q8TDI0 1954 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 ZNF815PA8K554 130 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 IFITM2Q01629 132 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 TPTE2P1Q5T6R2 138 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 LHFPL4Q7Z7J7 247 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 MBNL3Q9NUK0 354 aaKnown RBP5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 A0A0G2JNJ9 132 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 ADARB2-AS1A8MUL3 147 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 LDLRAD4O15165 306 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 CD28P10747 220 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 CD33P20138 364 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 ADMP35318 185 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 SRSF1Q07955 248 aaKnown RBP eCLIP5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 Q9UFV3 132 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 PSG8Q9UQ74 426 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 PRRC2BQ5JSZ5 2229 aaKnown RBP5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 OTOFQ9HC10 1997 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 UTRNP46939 3433 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 LCTP09848 1927 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 IGKV1-9A0A0C4DH69 117 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 SLC25A20O43772 301 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 CD55P08174 381 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 DUTP33316 252 aaKnown RBP5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 CMC4P56277 68 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 Q0VFX4 171 aa5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 PEF1Q9UBV8 284 aaKnown RBP5.95□□□□□ -1.46
SYNPO2-205ENST00000504178 EVI2AP22794 236 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 CTAG1AP78358 180 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 GFI1BQ5VTD9 330 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 NUDT11Q96G61 164 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 MESP1Q9BRJ9 268 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 OR10W1Q8NGF6 305 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 CARHSP1Q9Y2V2 147 aaKnown RBP5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 A0A087WV48 116 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 PRADC1Q9BSG0 188 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 SSBP4Q9BWG4 385 aaPredicted RBP5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 CHTOPQ9Y3Y2 248 aaKnown RBP5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 GON4LQ3T8J9 2241 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 LTBP1Q14766 1721 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 A0A087WWC5 75 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 IGHV1-3A0A0C4DH29 117 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 C19orf67A6NJJ6 358 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 TMEM178BH3BS89 294 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 IGHV1-8P0DP01 117 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 PRB4P10163 310 aaPredicted RBP5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 CRYGSP22914 178 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 PPIFP30405 207 aaKnown RBP5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 C14orf144Q96I85 54 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 C11orf68Q9H3H3 251 aaKnown RBP5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 DMRT1Q9Y5R6 373 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 SPAG17Q6Q759 2223 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 IGHV4-39P01824 125 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 RPL23P62829 140 aaKnown RBP5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 FAM19A2Q8N3H0 131 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 ST6GALNAC3Q8NDV1 305 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 TDRD6O60522 2096 aaKnown RBP5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 APOMO95445 188 aa5.94□□□□□ -1.46
SYNPO2-205ENST00000504178 IGKV2-40A0A087WW87 121 aaPredicted RBP5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 IGKV2D-40P01614 121 aaPredicted RBP5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 CCL20P78556 96 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 DEFB121Q5J5C9 76 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 PAQR4Q8N4S7 273 aaPredicted RBP5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 NXT2Q9NPJ8 142 aaKnown RBP5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 RNF222A6NCQ9 220 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 RPL35AP18077 110 aaKnown RBP5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 RCHY1Q96PM5 261 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 CD177Q8N6Q3 437 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 OR5A1Q8NGJ0 315 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 ZNF319Q9P2F9 582 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 TRAV5A0A0B4J249 113 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 CLPSP04118 112 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 RPL15P61313 204 aaKnown RBP5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 SRSF7Q16629 238 aaKnown RBP eCLIP5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 MINOS1Q5TGZ0 78 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 ASCL4Q6XD76 172 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 NABP1Q96AH0 204 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 CHCHD5Q9BSY4 110 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 SEPSECSQ9HD40 501 aaKnown RBP5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 SLC25A15Q9Y619 301 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 MINOS1-NBL1R4GNA1 71 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 PRR32B1ATL7 298 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 FXYD7P58549 80 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms