RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 A0A1B0GU03 582 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 A0A1B0GVY2 172 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 SMIM31A0A1B0GVY4 71 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 MEIS3P1A6NDR6 274 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 APOHP02749 345 aaPredicted RBP4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 P0DMU3 169 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 FAM231AP0DMU4 169 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 FAM231CP0DMU5 169 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 MED14OSP0DP75 135 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 RNASE2P10153 161 aaKnown RBP4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 SLC25A4P12235 298 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 DEFB131AP59861 70 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 YPEL3P61236 119 aaPredicted RBP4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 NUTF2P61970 127 aaKnown RBP4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 KIAA1109Q2LD37 5005 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 CENPSQ8N2Z9 138 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 LILRB2Q8N423 598 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 ZFAND1Q8TCF1 268 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 C15orf40Q8WUR7 153 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 MRGPRFQ96AM1 343 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 NARS2Q96I59 477 aaKnown RBP4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 PCLOQ9Y6V0 5065 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 IGHV4-4A0A075B6R2 117 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 IGHV4-28A0A0C4DH34 117 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 TEX48A0A1B0GUV7 120 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 RPS10-NUDT3A0A1W2PQS6 291 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 TMEM189A5PLL7 270 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 SMIM9A6NGZ8 99 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 IGLL5B9A064 214 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 ATP6V1G2O95670 118 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 CDS2O95674 445 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 IGKV1-17P01599 117 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 IGKV1-5P01602 117 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 RBMY1A1P0DJD3 496 aaKnown RBP4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 RBMY1CP0DJD4 496 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 UCP1P25874 307 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 HLA-DMAP28067 261 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 HLA-DMBP28068 263 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 HTR2BP41595 481 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 P2RY1P47900 373 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 TFPI2P48307 235 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 ATP5IP56385 69 aaPredicted RBP4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 SPCS3P61009 180 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 SSBP1Q04837 148 aaKnown RBP4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 OXA1LQ15070 435 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 RBMY1FQ15415 496 aaKnown RBP4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 SURF2Q15527 256 aaPredicted RBP4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 LGALS9BQ3B8N2 356 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 PHLDA2Q53GA4 152 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 C2orf83Q53S99 150 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 C16orf54Q6UWD8 224 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 GBGT1Q8N5D6 347 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 FAM24BQ8N5W8 94 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 POM121L12Q8N7R1 296 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 SLC35G3Q8N808 338 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 OR1S2Q8NGQ3 325 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 RNASEH2CQ8TDP1 164 aaKnown RBP4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 PINX1Q96BK5 328 aaKnown RBP4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 YIPF6Q96EC8 236 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 ABHD1Q96SE0 405 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 PDCD10Q9BUL8 212 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 FNDC4Q9H6D8 234 aaPredicted RBP4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 FBXL17Q9UF56 701 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 TBC1D24Q9ULP9 559 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 DNAH2Q9P225 4427 aa4.41□□□□□ -1.7
LSM3P4-201ENST00000502948 IGHV3OR16-13A0A075B7E8 117 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 ELOA3CA0A087WX78 387 aaPredicted RBP4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 A0A087WXM4 84 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 IGHV3-49A0A0A0MS15 119 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 IGHV3-74A0A0B4J1X5 117 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 C3orf85A0A1B0GTC6 90 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 BUB3O43684 328 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 GSTZ1O43708 216 aaPredicted RBP4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 CD74P04233 296 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 FCER2P06734 321 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 IGLC1P0CG04 106 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 NUP62P37198 522 aaPredicted RBP4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 AKR1C2P52895 323 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 PIGPP57054 158 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 SNRPD3P62318 126 aaKnown RBP4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 RPL11P62913 178 aaKnown RBP4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 NEDD8Q15843 81 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 SPATA31B1PQ5VZV4 182 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 LEMD1Q68G75 181 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 ETFRF1Q6IPR1 90 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 ZNF705AQ6ZN79 300 aaPredicted RBP4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 Q6ZTC4 211 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 NOXA1Q86UR1 476 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 CCDC71LQ8N9Z2 235 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 TERB2Q8NHR7 220 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 GLMPQ8WWB7 406 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 TP53RKQ96S44 253 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 VCX3AQ9NNX9 186 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 MTFP1Q9UDX5 166 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 RABAC1Q9UI14 185 aa4.4□□□□□ -1.71
LSM3P4-201ENST00000502948 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 IGKV3-7A0A075B6H7 116 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 DEFB131BA0A096LNP1 70 aa4.39□□□□□ -1.71
LSM3P4-201ENST00000502948 PIGBOS1A0A0B4J2F0 54 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms