RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 DOPEY2Q9Y3R5 2298 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 CNIH1O95406 144 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 MBP02144 154 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 CD5P06127 495 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 OPRK1P41145 380 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 PVRIGQ6DKI7 326 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 MBD3L1Q8WWY6 194 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 CACNG8Q8WXS5 425 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 TREM1Q9NP99 234 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 NAV3Q8IVL0 2385 aa20.71■□□□□ 0.91
HOXB3-212ENST00000498678 TRAV1-1A0A0B4J248 108 aa20.71■□□□□ 0.91
HOXB3-212ENST00000498678 NCBP2LA6PVI3 153 aaKnown RBP20.71■□□□□ 0.91
HOXB3-212ENST00000498678 TMEM144Q7Z5S9 345 aa20.71■□□□□ 0.91
HOXB3-212ENST00000498678 SVEP1Q4LDE5 3571 aa20.71■□□□□ 0.91
HOXB3-212ENST00000498678 BTBD17A6NE02 478 aa20.7■□□□□ 0.91
HOXB3-212ENST00000498678 BRD3OSQ6XYD6 125 aa20.7■□□□□ 0.9
HOXB3-212ENST00000498678 LINC01356Q8N9X3 169 aa20.7■□□□□ 0.9
HOXB3-212ENST00000498678 OR10G4Q8NGN3 311 aa20.7■□□□□ 0.9
HOXB3-212ENST00000498678 OR10G9Q8NGN4 311 aa20.7■□□□□ 0.9
HOXB3-212ENST00000498678 OR10G7Q8NGN6 311 aa20.7■□□□□ 0.9
HOXB3-212ENST00000498678 SSMEM1Q8WWF3 244 aa20.7■□□□□ 0.9
HOXB3-212ENST00000498678 SRSF8Q9BRL6 282 aaKnown RBP20.7■□□□□ 0.9
HOXB3-212ENST00000498678 FNDC4Q9H6D8 234 aaPredicted RBP20.7■□□□□ 0.9
HOXB3-212ENST00000498678 HBE1P02100 147 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 IGHV4-38-2P0DP08 117 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 MFAP2P55001 183 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 LOXL1Q08397 574 aaPredicted RBP20.69■□□□□ 0.9
HOXB3-212ENST00000498678 FXYD3Q14802 87 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 GUK1Q16774 197 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 TUBA4BQ9H853 241 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 SOX15O60248 233 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 GATA3P23771 443 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 PPT1P50897 306 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 C19orf35Q6ZS72 473 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 PXMP4Q9Y6I8 212 aa20.69■□□□□ 0.9
HOXB3-212ENST00000498678 IGKV1OR2-108A0A075B7D4 117 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 PKIAP61925 76 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 Q5PR19 223 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 MIC13Q5XKP0 118 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 LCN15Q6UWW0 184 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 OR1P1Q8NH06 330 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 OR2T6Q8NHC8 308 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 HIST1H2BAQ96A08 127 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 ABCA12Q86UK0 2595 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 C9JQL5 133 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 RNF223E7ERA6 249 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 YIF1AO95070 293 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 HIST1H1BP16401 226 aaKnown RBP20.68■□□□□ 0.9
HOXB3-212ENST00000498678 RAB31Q13636 194 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 ACOT6Q3I5F7 207 aaPredicted RBP20.68■□□□□ 0.9
HOXB3-212ENST00000498678 Q8N9W7 124 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 MAPK1IP1LQ8NDC0 245 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 MBD6Q96DN6 1003 aa20.68■□□□□ 0.9
HOXB3-212ENST00000498678 AVPP01185 164 aa20.67■□□□□ 0.9
HOXB3-212ENST00000498678 ZNF562Q6V9R5 426 aa20.67■□□□□ 0.9
HOXB3-212ENST00000498678 F11RQ9Y624 299 aaKnown RBP20.67■□□□□ 0.9
HOXB3-212ENST00000498678 CX3CL1P78423 397 aa20.66■□□□□ 0.9
HOXB3-212ENST00000498678 GCSAMLQ5JQS6 135 aa20.66■□□□□ 0.9
HOXB3-212ENST00000498678 SLC35E1Q96K37 410 aa20.66■□□□□ 0.9
HOXB3-212ENST00000498678 C1RLQ9NZP8 487 aa20.66■□□□□ 0.9
HOXB3-212ENST00000498678 DDTP30046 118 aa20.66■□□□□ 0.9
HOXB3-212ENST00000498678 RPL29P47914 159 aaKnown RBP20.66■□□□□ 0.9
HOXB3-212ENST00000498678 EIF5A2Q9GZV4 153 aaKnown RBP20.66■□□□□ 0.9
HOXB3-212ENST00000498678 SLC39A9Q9NUM3 307 aa20.66■□□□□ 0.9
HOXB3-212ENST00000498678 A0A0U1RQK1 487 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 MAP1LC3B2A6NCE7 125 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 FGF8P55075 233 aaPredicted RBP20.65■□□□□ 0.9
HOXB3-212ENST00000498678 ABHD5Q8WTS1 349 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 FAM103A1Q9BTL3 118 aaKnown RBP20.65■□□□□ 0.9
HOXB3-212ENST00000498678 PBDC1Q9BVG4 233 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 MAP1LC3BQ9GZQ8 125 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 SLC25A22Q9H936 323 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 KCNIP2Q9NS61 270 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 MAP1AP78559 2803 aaPredicted RBP20.65■□□□□ 0.9
HOXB3-212ENST00000498678 RD3LP0DJH9 198 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 MISP3Q96FF7 219 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 ACY3Q96HD9 319 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 ACTR3CQ9C0K3 210 aaPredicted RBP20.65■□□□□ 0.9
HOXB3-212ENST00000498678 MEGF9Q9H1U4 602 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 PRDM13Q9H4Q3 707 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 SLC45A2Q9UMX9 530 aa20.65■□□□□ 0.9
HOXB3-212ENST00000498678 NAV2Q8IVL1 2488 aa20.64■□□□□ 0.89
HOXB3-212ENST00000498678 CTXND1A0A1B0GTU2 59 aa20.64■□□□□ 0.89
HOXB3-212ENST00000498678 CYB5BO43169 146 aa20.64■□□□□ 0.89
HOXB3-212ENST00000498678 DEFA4P12838 97 aa20.64■□□□□ 0.89
HOXB3-212ENST00000498678 KLF17Q5JT82 389 aaPredicted RBP20.64■□□□□ 0.89
HOXB3-212ENST00000498678 STPG3Q8N7X2 389 aa20.64■□□□□ 0.89
HOXB3-212ENST00000498678 IGHV3-48P01763 117 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 NUTF2P61970 127 aaKnown RBP20.63■□□□□ 0.89
HOXB3-212ENST00000498678 PRR20EP86478 221 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 PRR20CP86479 221 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 PRR20DP86480 221 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 PRR20BP86481 221 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 PRR20AP86496 221 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 COTL1Q14019 142 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 RARRES2Q99969 163 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 MRPL36Q9P0J6 103 aaKnown RBP20.63■□□□□ 0.89
HOXB3-212ENST00000498678 RBFOX3A6NFN3 312 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 CRYGCP07315 174 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 LINC00869P0C866 280 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms