RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 MGST2Q99735 147 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 TXNDC17Q9BRA2 123 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 MRPL32Q9BYC8 188 aaKnown RBP6.69□□□□□ -1.34
SF3A1-210ENST00000498259 NPFFR1Q9GZQ6 430 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 EIF5A2Q9GZV4 153 aaKnown RBP6.69□□□□□ -1.34
SF3A1-210ENST00000498259 PRDM13Q9H4Q3 707 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 ZNF355PQ9NSJ1 428 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 TMEM160Q9NX00 188 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 VPREB3Q9UKI3 123 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 UTP20O75691 2785 aaKnown RBP6.69□□□□□ -1.34
SF3A1-210ENST00000498259 ARHGAP32A7KAX9 2087 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 TENM4Q6N022 2769 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 DOPEY2Q9Y3R5 2298 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 WNK2Q9Y3S1 2297 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 IGLV11-55A0A075B6I3 123 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 TRBV7-1A0A0A6YYK4 115 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 TRAV41A0A0B4J266 112 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 A0A0G2JLM5 398 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 ANKRD34BA5PLL1 514 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 MAP1LC3B2A6NCE7 125 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 FAM223BA6NKX1 122 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 SEC14L6B5MCN3 397 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 I3L521 148 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 GNG7O60262 68 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 CLN5O75503 358 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 CXorf1O96002 111 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 IGHG2P01859 326 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 PAX6P26367 422 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 OR10J1P30954 320 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 RND2P52198 227 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 CRIP2P52943 208 aaPredicted RBP6.68□□□□□ -1.34
SF3A1-210ENST00000498259 SLC35B1P78383 322 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 PRR20EP86478 221 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 PRR20CP86479 221 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 PRR20DP86480 221 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 PRR20BP86481 221 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 PRR20AP86496 221 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 C9orf152Q5JTZ5 239 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 TMEM219Q86XT9 240 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 FAM223AQ8IWN6 122 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 STPG3Q8N7X2 389 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 PCNPQ8WW12 178 aaKnown RBP6.68□□□□□ -1.34
SF3A1-210ENST00000498259 TMEM190Q8WZ59 177 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 RCC1LQ96I51 464 aaKnown RBP6.68□□□□□ -1.34
SF3A1-210ENST00000498259 NARS2Q96I59 477 aaKnown RBP6.68□□□□□ -1.34
SF3A1-210ENST00000498259 USMG5Q96IX5 58 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 PRSS22Q9GZN4 317 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 MAP1LC3BQ9GZQ8 125 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 DNAJC4Q9NNZ3 241 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 TREM1Q9NP99 234 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 MANBALQ9NQG1 85 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 TNFRSF19Q9NS68 423 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 C21orf62Q9NYP8 219 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 SLC45A2Q9UMX9 530 aa6.68□□□□□ -1.34
SF3A1-210ENST00000498259 RBFOX3A6NFN3 312 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 I3L2K1 104 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 ATP6V0E1O15342 81 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 NUPL2O15504 423 aaKnown RBP6.67□□□□□ -1.34
SF3A1-210ENST00000498259 COX7A2P2O60397 106 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 NDUFS6O75380 124 aaKnown RBP6.67□□□□□ -1.34
SF3A1-210ENST00000498259 LINC00869P0C866 280 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 APELAP0DMC3 54 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 FOSL1P15407 271 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 FCGR2BP31994 310 aaPredicted RBP6.67□□□□□ -1.34
SF3A1-210ENST00000498259 RPL15P61313 204 aaKnown RBP6.67□□□□□ -1.34
SF3A1-210ENST00000498259 SSBP2P81877 361 aaPredicted RBP6.67□□□□□ -1.34
SF3A1-210ENST00000498259 LY6EQ16553 131 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 GUK1Q16774 197 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 ECSCRQ19T08 205 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 KLK9Q2XQG4 91 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 KHDC3LQ587J8 217 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 FAM122CQ6P4D5 195 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 PQLC2Q6ZP29 291 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 RPP25LQ8N5L8 163 aaKnown RBP6.67□□□□□ -1.34
SF3A1-210ENST00000498259 OR5T1Q8NG75 326 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 OR2T6Q8NHC8 308 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 Q8WTZ3 238 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 RAB24Q969Q5 203 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 EEF1AKMT3Q96AZ1 226 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 FAM210AQ96ND0 272 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 FAM103A1Q9BTL3 118 aaKnown RBP6.67□□□□□ -1.34
SF3A1-210ENST00000498259 YAE1D1Q9NRH1 226 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 TECRQ9NZ01 308 aaKnown RBP6.67□□□□□ -1.34
SF3A1-210ENST00000498259 FBXL7Q9UJT9 491 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 KLK9Q9UKQ9 250 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 PTPN13Q12923 2485 aa6.67□□□□□ -1.34
SF3A1-210ENST00000498259 HELZ2Q9BYK8 2649 aaKnown RBP6.66□□□□□ -1.34
SF3A1-210ENST00000498259 FBN2P35556 2912 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 TMEM89A2RUT3 159 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 HYPMO75409 117 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 RD3LP0DJH9 198 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 ZP3P21754 424 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 FHITP49789 147 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 YPEL3P61236 119 aaPredicted RBP6.66□□□□□ -1.34
SF3A1-210ENST00000498259 RELQ04864 619 aaPredicted RBP6.66□□□□□ -1.34
SF3A1-210ENST00000498259 ATP5G2Q06055 141 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 Q56UQ5 140 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 C10orf113Q5VZT2 155 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 MIC13Q5XKP0 118 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 SPSB3Q6PJ21 355 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms