RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 GCSAMLQ5JQS6 135 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 CYP2G1PQ6ZSU1 146 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 Q8N9W7 124 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 THAP8Q8NA92 274 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 MBD6Q96DN6 1003 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 Q96MF0 132 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 RASL11BQ9BPW5 248 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 SLC25A33Q9BSK2 321 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 SEC11CQ9BY50 192 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 MANBALQ9NQG1 85 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 CARHSP1Q9Y2V2 147 aaKnown RBP6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 CREBBPQ92793 2442 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 IGKV1OR2-108A0A075B7D4 117 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 TCRBV4S1A1TA0A5B7 111 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 NPIPB5A8MRT5 1133 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 J3QLI3 93 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 SCO1O75880 301 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 MT-CO2P00403 227 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 IGHV3-48P01763 117 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 LINC00869P0C866 280 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 ARL14EPLP0DKL9 152 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 CTRB1P17538 263 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 GUCA2BQ16661 112 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 ECSCRQ19T08 205 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 KHDC3LQ587J8 217 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 PVRIGQ6DKI7 326 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 HIST2H2BCQ6DN03 193 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 CTRB2Q6GPI1 263 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 SVBPQ8N300 66 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 MAPK1IP1LQ8NDC0 245 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 OR1L6Q8NGR2 347 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 OR2T6Q8NHC8 308 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 RXFP4Q8TDU9 374 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 RAB24Q969Q5 203 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 RBM14Q96PK6 669 aaKnown RBP6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 SCRT1Q9BWW7 348 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 SMDT1Q9H4I9 107 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 SLC45A2Q9UMX9 530 aa6.4□□□□□ -1.38
PDZRN3-212ENST00000498048 IGHV3-21A0A0B4J1V1 117 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 IGHV7-81A0A0B4J1V7 117 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 C9JQL5 133 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 H3BUX3 64 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 ATP6V0E1O15342 81 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 COX7A2P2O60397 106 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 HSPB1P04792 205 aaKnown RBP6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 CRYGCP07315 174 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 IGHV4-31P0DP07 118 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 TAGLN2P37802 199 aaKnown RBP6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 CEBPGP53567 150 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 CX3CL1P78423 397 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 TMEM249Q2WGJ8 235 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 C10orf91Q5T1B1 145 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 ZNF562Q6V9R5 426 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 TMEM219Q86XT9 240 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 KRTAP1-3Q8IUG1 177 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 C5orf56Q8N8D9 126 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 NPIPB3Q92617 1050 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 PFDN5Q99471 154 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 RARRES2Q99969 163 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 HSPB9Q9BQS6 159 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 MRPL32Q9BYC8 188 aaKnown RBP6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 NKX6-2Q9C056 277 aaPredicted RBP6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 WNT10AQ9GZT5 417 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 SLC35B3Q9H1N7 401 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 MRPL36Q9P0J6 103 aaKnown RBP6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 DMRT1Q9Y5R6 373 aa6.39□□□□□ -1.39
PDZRN3-212ENST00000498048 IGKV1D-37A0A075B6S9 117 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 SNAPINO95295 136 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 CXorf1O96002 111 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 TGFAP01135 160 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 SRP19P09132 144 aaKnown RBP6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 OR5G3P0C626 314 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 STAG3L2P0CL84 134 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 STAG3L3P0CL85 134 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 GATA2P23769 480 aaPredicted RBP6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 PSMB3P49720 205 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 SELENOTP62341 195 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 MEF2BQ02080 365 aaPredicted RBP6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 LY6EQ16553 131 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 MLANAQ16655 118 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 KLF17Q5JT82 389 aaPredicted RBP6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 ASPHD1Q5U4P2 390 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 FAM78BQ5VT40 261 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 SPATA31B1PQ5VZV4 182 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 RBMS3Q6XE24 437 aaKnown RBP6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 SPNS3Q6ZMD2 512 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 CYB561D1Q8N8Q1 229 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 OR1L4Q8NGR5 311 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 FAM110DQ8TAY7 271 aaPredicted RBP6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 PSMG3-AS1Q96PY0 264 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 RNF2Q99496 336 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 TRGV9Q99603 122 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 SSX3Q99909 188 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 TMPRSS5Q9H3S3 457 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 TNFRSF19Q9NS68 423 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 DOK5Q9P104 306 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 VAX2Q9UIW0 290 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 FUT9Q9Y231 359 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms