RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 C8orf31Q8N9H6 132 aa9.46□□□□□ -0.9
SNRNP200-208ENST00000497539 RFESDQ8TAC1 157 aa9.46□□□□□ -0.9
SNRNP200-208ENST00000497539 MS4A5Q9H3V2 200 aa9.46□□□□□ -0.9
SNRNP200-208ENST00000497539 GEMIN7Q9H840 131 aaKnown RBP9.46□□□□□ -0.9
SNRNP200-208ENST00000497539 PAM16Q9Y3D7 125 aa9.46□□□□□ -0.9
SNRNP200-208ENST00000497539 ASPMQ8IZT6 3477 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 IGHV3-43A0A0B4J1X8 118 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 GRIFINA4D1Z8 144 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 J3QR06 171 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 IGHV3-43DP0DP04 118 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 IL3RAP26951 378 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 LOXP28300 417 aaPredicted RBP9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 CNN1P51911 297 aaKnown RBP9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 HNRNPA3P51991 378 aaKnown RBP9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 COX19Q49B96 90 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 FAM201AQ5SY85 155 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 TOMM20LQ6UXN7 152 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 PNKDQ8N490 385 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 PLPPR2Q96GM1 343 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 ADTRPQ96IZ2 230 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 SAP30LQ9HAJ7 183 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 DSCAMO60469 2012 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 hADV38S2A0JD32 116 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 ZG16O60844 167 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 C1QTNF9P0C862 333 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 SMIM17P0DL12 118 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 EDDM3BP56851 147 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 ADORA2A-AS1P86434 159 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 CENPVQ7Z7K6 275 aaPredicted RBP9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 ZNF114Q8NC26 417 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 OR52E5Q8NH55 327 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 CCL13Q99616 98 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 ZNF586Q9NXT0 402 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 TRAPPC1Q9Y5R8 145 aa9.45□□□□□ -0.9
SNRNP200-208ENST00000497539 C11orf94C9JXX5 98 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 TMEM250H0YL14 139 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 WIPF1O43516 503 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 IGLC2P0DOY2 106 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 IGLC3P0DOY3 106 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 ATP5G3P48201 142 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 ZNF134P52741 427 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 DUX4L9Q6RFH8 374 aaPredicted RBP9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 FAM216BQ8N7L0 139 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 VCX2Q9H322 139 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 RPUSD1Q9UJJ7 312 aaKnown RBP9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 CTXND1A0A1B0GTU2 59 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 NDUFB4O95168 129 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 THBS3P49746 956 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 POU2AF1Q16633 256 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 C5orf17Q8NAS9 161 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 HARBI1Q96MB7 349 aa9.44□□□□□ -0.9
SNRNP200-208ENST00000497539 BSNQ9UPA5 3926 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 IGLC7A0M8Q6 106 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 CCL21O00585 134 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 PDE6DO43924 150 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 PAFAH1B2P68402 229 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 CCL8P80075 99 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 SMAGPQ0VAQ4 97 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 ACOT6Q3I5F7 207 aaPredicted RBP9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 CT45A1Q5HYN5 189 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 ZNF562Q6V9R5 426 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 SLC25A48Q6ZT89 311 aaKnown RBP9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 NEGR1Q7Z3B1 354 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 OR8I2Q8N0Y5 310 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 CT45A3Q8NHU0 189 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 NEIL1Q96FI4 390 aaPredicted RBP9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 RAX2Q96IS3 184 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 PTPRQQ9UMZ3 2332 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 DEFB108AA8MXU0 73 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 GNB1P62873 340 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 H2BFWTQ7Z2G1 175 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 ANAPC16Q96DE5 110 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 SS18L2Q9UHA2 77 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 PSG8Q9UQ74 426 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 TIMM9Q9Y5J7 89 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 SVILO95425 2214 aa9.43□□□□□ -0.9
SNRNP200-208ENST00000497539 HYPMO75409 117 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 VWC2Q2TAL6 325 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 ZGRF1Q86YA3 2104 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 OR5B3Q8NH48 314 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 NPCDR1Q9BY65 106 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 MANBALQ9NQG1 85 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 SLC25A10Q9UBX3 287 aaPredicted RBP9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 K7EQM0 130 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 M0R1X1 148 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 FCN3O75636 299 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 ZNF672Q499Z4 452 aaPredicted RBP9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 KCNIP4Q6PIL6 250 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 Q6ZN92 141 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 ZNF709Q8N972 641 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 OR10P1Q8NGE3 313 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 SGMS2Q8NHU3 365 aa9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 PATZ1Q9HBE1 687 aaKnown RBP9.42□□□□□ -0.9
SNRNP200-208ENST00000497539 PMS2P5A8MQ11 134 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 TGFAP01135 160 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 IGLC1P0CG04 106 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 RPL15P61313 204 aaKnown RBP9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 LINC00311Q8N616 119 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms