RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ANKRD55Q3KP44 614 aa11.23□□□□□ -0.61
NEK4-206ENST00000496822 DUSP18Q8NEJ0 188 aa11.23□□□□□ -0.61
NEK4-206ENST00000496822 SPAG8Q99932 426 aaPredicted RBP11.23□□□□□ -0.61
NEK4-206ENST00000496822 KCNIP3Q9Y2W7 256 aa11.23□□□□□ -0.61
NEK4-206ENST00000496822 LOC102724200A0A096LPH7 203 aaPredicted RBP11.22□□□□□ -0.61
NEK4-206ENST00000496822 A0A0B4J293 547 aa11.22□□□□□ -0.61
NEK4-206ENST00000496822 H2AFB2P0C5Z0 115 aa11.22□□□□□ -0.61
NEK4-206ENST00000496822 ODF3L2Q3SX64 289 aa11.22□□□□□ -0.61
NEK4-206ENST00000496822 SP6Q3SY56 376 aa11.22□□□□□ -0.61
NEK4-206ENST00000496822 TMEM128Q5BJH2 165 aa11.22□□□□□ -0.61
NEK4-206ENST00000496822 NRARPQ7Z6K4 114 aa11.22□□□□□ -0.61
NEK4-206ENST00000496822 PINX1Q96BK5 328 aaKnown RBP11.22□□□□□ -0.61
NEK4-206ENST00000496822 NUDT15Q9NV35 164 aa11.22□□□□□ -0.61
NEK4-206ENST00000496822 IGHV3-49A0A0A0MS15 119 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 A0A0G2JRQ6 117 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 C3orf85A0A1B0GTC6 90 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 C15orf62A8K5M9 175 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 K7EMT4 169 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 NUPL2O15504 423 aaKnown RBP11.21□□□□□ -0.61
NEK4-206ENST00000496822 ST8SIA3O43173 380 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 AKR1C4P17516 323 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 FCGR2BP31994 310 aaPredicted RBP11.21□□□□□ -0.61
NEK4-206ENST00000496822 AKR1C2P52895 323 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 MFAP4P55083 255 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 OVOL2Q9BRP0 275 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 RTBDNQ9BSG5 229 aaPredicted RBP11.21□□□□□ -0.61
NEK4-206ENST00000496822 NAA60Q9H7X0 242 aa11.21□□□□□ -0.61
NEK4-206ENST00000496822 EPPK1P58107 5090 aaKnown RBP11.2□□□□□ -0.62
NEK4-206ENST00000496822 TRAV6A0A075B6T7 132 aa11.2□□□□□ -0.62
NEK4-206ENST00000496822 CRYM-AS1A6NIL9 109 aa11.2□□□□□ -0.62
NEK4-206ENST00000496822 ATG12O94817 140 aa11.2□□□□□ -0.62
NEK4-206ENST00000496822 YIF1AO95070 293 aa11.2□□□□□ -0.62
NEK4-206ENST00000496822 SRPXP78539 464 aa11.2□□□□□ -0.62
NEK4-206ENST00000496822 DHODHQ02127 395 aa11.2□□□□□ -0.62
NEK4-206ENST00000496822 RELQ04864 619 aaPredicted RBP11.2□□□□□ -0.62
NEK4-206ENST00000496822 TRIM16LQ309B1 348 aa11.2□□□□□ -0.62
NEK4-206ENST00000496822 RNF2Q99496 336 aa11.2□□□□□ -0.62
NEK4-206ENST00000496822 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
NEK4-206ENST00000496822 ALMS1Q8TCU4 4167 aa11.2□□□□□ -0.62
NEK4-206ENST00000496822 IGHV3OR16-13A0A075B7E8 117 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 IGHV3-74A0A0B4J1X5 117 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 IGHV7-4-1A0A0J9YVY3 117 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 CHEK1O14757 476 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 GNG7O60262 68 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 PRAF2O60831 178 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 VAMP1P23763 118 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 UCP1P25874 307 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 ERHP84090 104 aaKnown RBP11.19□□□□□ -0.62
NEK4-206ENST00000496822 C4orf46Q504U0 113 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 LAMTOR1Q6IAA8 161 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 SLC35G3Q8N808 338 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 OR10C1Q96KK4 312 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 TXN2Q99757 166 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 RHPN1-AS1Q9BWJ2 59 aa11.19□□□□□ -0.62
NEK4-206ENST00000496822 GPN1Q9HCN4 374 aaPredicted RBP11.19□□□□□ -0.62
NEK4-206ENST00000496822 OR4C46A6NHA9 309 aa11.18□□□□□ -0.62
NEK4-206ENST00000496822 INMT-MINDY4F8WBC2 141 aa11.18□□□□□ -0.62
NEK4-206ENST00000496822 IFNA17P01571 189 aa11.18□□□□□ -0.62
NEK4-206ENST00000496822 RNASE2P10153 161 aaKnown RBP11.18□□□□□ -0.62
NEK4-206ENST00000496822 TMEM116Q8NCL8 245 aa11.18□□□□□ -0.62
NEK4-206ENST00000496822 LHFPL5Q8TAF8 219 aa11.18□□□□□ -0.62
NEK4-206ENST00000496822 GALNT14Q96FL9 552 aa11.18□□□□□ -0.62
NEK4-206ENST00000496822 MARVELD1Q9BSK0 173 aa11.18□□□□□ -0.62
NEK4-206ENST00000496822 FLVCR2Q9UPI3 526 aa11.18□□□□□ -0.62
NEK4-206ENST00000496822 IGKV3-7A0A075B6H7 116 aa11.17□□□□□ -0.62
NEK4-206ENST00000496822 INS-IGF2F8WCM5 200 aa11.17□□□□□ -0.62
NEK4-206ENST00000496822 OR5AC1P0C628 307 aa11.17□□□□□ -0.62
NEK4-206ENST00000496822 OR4E1P0C645 316 aa11.17□□□□□ -0.62
NEK4-206ENST00000496822 ANXA7P20073 488 aaKnown RBP11.17□□□□□ -0.62
NEK4-206ENST00000496822 TFPI2P48307 235 aa11.17□□□□□ -0.62
NEK4-206ENST00000496822 HOXA1P49639 335 aaPredicted RBP11.17□□□□□ -0.62
NEK4-206ENST00000496822 ZNF124Q15973 351 aa11.17□□□□□ -0.62
NEK4-206ENST00000496822 DEFB135Q30KP9 77 aa11.17□□□□□ -0.62
NEK4-206ENST00000496822 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
NEK4-206ENST00000496822 Q6ZRM9 215 aa11.17□□□□□ -0.62
NEK4-206ENST00000496822 MRPL36Q9P0J6 103 aaKnown RBP11.17□□□□□ -0.62
NEK4-206ENST00000496822 SFT2D2O95562 160 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 IL5P05113 134 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 RPL35AP18077 110 aaKnown RBP11.16□□□□□ -0.62
NEK4-206ENST00000496822 SNCAP37840 140 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 APOC4P55056 127 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 EWSR1Q01844 656 aaKnown RBP eCLIP11.16□□□□□ -0.62
NEK4-206ENST00000496822 PPP1R1AQ13522 171 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 LYG2Q86SG7 212 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 APRG1Q8IVJ8 170 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 COQ8AQ8NI60 647 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 RNASE11Q8TAA1 199 aaKnown RBP11.16□□□□□ -0.62
NEK4-206ENST00000496822 IL17DQ8TAD2 202 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 TMEM230Q96A57 120 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 RRNAD1Q96FB5 475 aaKnown RBP11.16□□□□□ -0.62
NEK4-206ENST00000496822 PDCD10Q9BUL8 212 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 TMEM222Q9H0R3 208 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 FNDC4Q9H6D8 234 aaPredicted RBP11.16□□□□□ -0.62
NEK4-206ENST00000496822 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
NEK4-206ENST00000496822 TRAV14DV4A0A0A6YYC5 116 aa11.15□□□□□ -0.62
NEK4-206ENST00000496822 APOHP02749 345 aaPredicted RBP11.15□□□□□ -0.62
NEK4-206ENST00000496822 NPBWR1P48145 328 aa11.15□□□□□ -0.62
NEK4-206ENST00000496822 DHRS2Q13268 280 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms